CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26666	Soybean	cytosol	55.37	59.29
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	23.14	56.0
KRH22649	Soybean	cytosol	28.93	52.24
KRH26667	Soybean	nucleus, plastid	47.11	50.89
KRH30377	Soybean	plastid	45.45	50.0
KRH25293	Soybean	plastid	42.98	47.71
TraesCS7D01G324300.1	Wheat	cytosol	23.14	43.08
Os04t0684600-01	Rice	cytosol	27.27	40.74
Os08t0102250-00	Rice	cytosol	22.31	39.71
KRH67976	Soybean	nucleus, plastid	35.54	39.45
KRG96232	Soybean	nucleus, plastid	35.54	39.45
TraesCS2A01G383200.1	Wheat	cytosol	24.79	36.59
TraesCS2D01G379500.1	Wheat	cytosol	24.79	36.59
KRH22650	Soybean	cytosol, plastid	32.23	36.45
Zm00001d001776_P001	Maize	cytosol, plastid	23.97	36.25
TraesCS2B01G400400.1	Wheat	cytosol	24.79	36.14
HORVU2Hr1G089140.1	Barley	cytosol	24.79	36.14
EES11682	Sorghum	cytosol, plastid	26.45	34.04
GSMUA_Achr10P...	Banana	cytosol	33.06	33.9
GSMUA_Achr11P...	Banana	nucleus	29.75	33.64
Zm00001d038287_P001	Maize	mitochondrion	36.36	33.59
TraesCS1A01G275700.1	Wheat	plastid	37.19	33.58
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	36.36	33.33
TraesCS1D01G275300.1	Wheat	nucleus	36.36	33.08
KRH26665	Soybean	plastid	28.1	33.01
GSMUA_Achr8P16130_001	Banana	cytosol	28.1	33.01
TraesCS3A01G375700.1	Wheat	plastid	33.88	32.28
TraesCS2D01G597400.1	Wheat	cytosol, plastid	22.31	31.76
HORVU3Hr1G083720.1	Barley	plastid	33.06	31.75
TraesCS3D01G368200.1	Wheat	plastid	33.06	31.75
TraesCS3B01G407900.1	Wheat	plastid	33.06	31.5
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	32.23	31.2
Zm00001d042754_P001	Maize	mitochondrion, plastid	31.41	30.89
Os01t0863500-01	Rice	plastid	32.23	30.23
Os04t0415000-01	Rice	cytosol	28.93	30.17
GSMUA_Achr6P19430_001	Banana	nucleus	28.93	30.17
Zm00001d025361_P001	Maize	nucleus	27.27	29.73
TraesCS2A01G296600.1	Wheat	cytosol	28.1	29.57
EES10769	Sorghum	mitochondrion	28.1	29.57
TraesCS4B01G346800.1	Wheat	plastid	28.1	29.57
TraesCS2D01G294500.1	Wheat	cytosol	28.1	29.57
TraesCS2B01G312800.1	Wheat	cytosol	28.1	29.57
OQU87905	Sorghum	mitochondrion, plastid	27.27	27.97
Zm00001d016743_P001	Maize	nucleus	33.88	27.33
HORVU1Hr1G074000.6	Barley	mitochondrion	36.36	27.16
EES05192	Sorghum	nucleus, plastid	32.23	27.08
Os02t0536500-01	Rice	mitochondrion	27.27	26.83
GSMUA_Achr9P02640_001	Banana	cytosol	25.62	26.27
Zm00001d003763_P001	Maize	cytosol	28.1	25.95
EES19598	Sorghum	cytosol, plastid	37.19	24.59
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	36.36	24.04
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	27.27	23.4
GSMUA_Achr6P12990_001	Banana	nucleus	25.62	15.2

Protein Annotations

EMBL:ACUP02008424	EnsemblPlants:KRH22648	EnsemblPlantsGene:GLYMA_13G314200	PANTHER:PTHR33177	PANTHER:PTHR33177:SF11	ProteinID:KRH22648
ProteinID:KRH22648.1	SEG:seg	UniParc:UPI000233C09D	UniProt:I1M4A4	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr13:+:40949752..40951896

Molecular Weight (calculated)

13323.6 Da

IEP (calculated)

5.253

GRAVY (calculated)

-0.641

Length

121 amino acids

Sequence
(BLAST)

001: MCKRKSPGSE LRPPSRPTSP ELSSSTSSGE WPEFSSSSPS ASSASYTSKM PKEGICVYFP EAEEENVQRA NAAPETKAMD LVGCPRCFMY VMLSEADPKC
101: PKCKSTVFLE FFKAENFKTD N

Best Arabidopsis Sequence Match ( AT5G06270.1 )
(BLAST)

001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.