Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G407900.1 | Wheat | plastid | 93.65 | 92.91 |
| TraesCS3D01G368200.1 | Wheat | plastid | 88.1 | 88.1 |
| TraesCS3A01G375700.1 | Wheat | plastid | 87.3 | 86.61 |
| Os01t0863500-01 | Rice | plastid | 80.16 | 78.29 |
| Zm00001d042754_P001 | Maize | mitochondrion, plastid | 72.22 | 73.98 |
| OQU87905 | Sorghum | mitochondrion, plastid | 60.32 | 64.41 |
| GSMUA_Achr8P07800_001 | Banana | cytosol, extracellular | 21.43 | 54.0 |
| HORVU1Hr1G074000.6 | Barley | mitochondrion | 62.7 | 48.77 |
| KRH67976 | Soybean | nucleus, plastid | 39.68 | 45.87 |
| KRG96232 | Soybean | nucleus, plastid | 39.68 | 45.87 |
| HORVU2Hr1G089140.1 | Barley | cytosol | 29.37 | 44.58 |
| GSMUA_Achr10P... | Banana | cytosol | 40.48 | 43.22 |
| CDX80998 | Canola | plastid | 41.27 | 42.98 |
| AT5G06270.1 | Thale cress | mitochondrion, plastid | 41.27 | 42.62 |
| CDY64732 | Canola | plastid | 41.27 | 42.28 |
| Bra009178.1-P | Field mustard | plastid | 41.27 | 42.28 |
| CDY47258 | Canola | plastid | 40.48 | 42.15 |
| Bra028737.1-P | Field mustard | plastid | 40.48 | 42.15 |
| AT3G11600.1 | Thale cress | plastid | 38.89 | 41.88 |
| KRH30377 | Soybean | plastid | 36.51 | 41.82 |
| KRH22649 | Soybean | cytosol | 22.22 | 41.79 |
| Bra034826.1-P | Field mustard | plastid | 38.89 | 41.53 |
| GSMUA_Achr6P19430_001 | Banana | nucleus | 38.1 | 41.38 |
| Bra038666.1-P | Field mustard | plastid | 38.1 | 41.38 |
| Solyc10g083140.1.1 | Tomato | plastid | 22.22 | 41.18 |
| CDY08510 | Canola | nucleus, plastid | 38.1 | 40.68 |
| Bra005888.1-P | Field mustard | plastid | 38.89 | 40.5 |
| CDY01039 | Canola | mitochondrion, nucleus | 37.3 | 39.83 |
| Solyc01g007870.2.1 | Tomato | nucleus | 39.68 | 39.68 |
| Bra001413.1-P | Field mustard | plastid | 37.3 | 39.5 |
| CDX73863 | Canola | plastid | 37.3 | 39.5 |
| PGSC0003DMT400072576 | Potato | plastid | 32.54 | 38.68 |
| Solyc06g073990.1.1 | Tomato | nucleus, plastid | 36.51 | 38.66 |
| KRH25293 | Soybean | plastid | 33.33 | 38.53 |
| PGSC0003DMT400050486 | Potato | cytosol, plastid | 35.71 | 38.14 |
| CDY14087 | Canola | plastid | 40.48 | 37.78 |
| CDY04984 | Canola | plastid | 39.68 | 37.04 |
| PGSC0003DMT400042213 | Potato | cytosol | 38.1 | 36.36 |
| PGSC0003DMT400015190 | Potato | nucleus, plastid | 34.92 | 35.77 |
| KRH22650 | Soybean | cytosol, plastid | 30.16 | 35.51 |
| KRH22648 | Soybean | nucleus, plastid | 31.75 | 33.06 |
| KRH26667 | Soybean | nucleus, plastid | 27.78 | 31.25 |
| HORVU2Hr1G073380.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 34.92 | 31.21 |
| KRH26665 | Soybean | plastid | 24.6 | 30.1 |
| KRH26666 | Soybean | cytosol | 25.4 | 28.32 |
| VIT_08s0007g02600.t01 | Wine grape | plastid | 37.3 | 21.56 |
Protein Annotations
| EMBL:AK374434 | EnsemblPlants:HORVU3Hr1G083720.1 | EnsemblPlantsGene:HORVU3Hr1G083720 | PANTHER:PTHR33177 | PANTHER:PTHR33177:SF9 | SEG:seg |
| UniParc:UPI0002008F54 | UniProt:F2EE58 | MapMan:35.2 | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EE58]
Coordinates
chrchr3H:-:604766530..604767595
Molecular Weight (calculated)
13036.4 Da
IEP (calculated)
11.177
GRAVY (calculated)
-0.590
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRNGGKVSK LESLRLSLSR ARGGGGQSST STTTAPPGGG GANGAISTSP RRLSSSSSST ASPPSSCVSS EGSPDAAAGA PMVLAGCPRC MMYVMLSRED
101: PRCPRCHSAV LLDFNDDQHR RPRQRR
101: PRCPRCHSAV LLDFNDDQHR RPRQRR
1: MNQEAASNLG LDLKLNISPS LDSSLLTESS SSSLCSEEAE GGGGEAKSMV VVGCPNCIMY IITSLENDPR CPRCNSHVLL DFLTGNHSKK STS
Arabidopsis Description
AT5G22270 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMS4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.