Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400015190 | Potato | nucleus, plastid | 88.24 | 85.37 |
| GSMUA_Achr8P07800_001 | Banana | cytosol, extracellular | 24.37 | 58.0 |
| KRH67976 | Soybean | nucleus, plastid | 48.74 | 53.21 |
| KRG96232 | Soybean | nucleus, plastid | 48.74 | 53.21 |
| Bra001413.1-P | Field mustard | plastid | 49.58 | 49.58 |
| CDX73863 | Canola | plastid | 49.58 | 49.58 |
| TraesCS7D01G324300.1 | Wheat | cytosol | 26.89 | 49.23 |
| AT5G06270.1 | Thale cress | mitochondrion, plastid | 50.42 | 49.18 |
| Bra038666.1-P | Field mustard | plastid | 47.9 | 49.14 |
| CDY47258 | Canola | plastid | 49.58 | 48.76 |
| CDY08510 | Canola | nucleus, plastid | 47.9 | 48.31 |
| Bra034826.1-P | Field mustard | plastid | 47.9 | 48.31 |
| Bra009178.1-P | Field mustard | plastid | 49.58 | 47.97 |
| CDY64732 | Canola | plastid | 49.58 | 47.97 |
| Bra028737.1-P | Field mustard | plastid | 48.74 | 47.93 |
| AT3G11600.1 | Thale cress | plastid | 47.06 | 47.86 |
| CDY01039 | Canola | mitochondrion, nucleus | 47.06 | 47.46 |
| CDX80998 | Canola | plastid | 47.9 | 47.11 |
| Bra005888.1-P | Field mustard | plastid | 47.9 | 47.11 |
| Solyc01g007870.2.1 | Tomato | nucleus | 49.58 | 46.83 |
| GSMUA_Achr6P19430_001 | Banana | nucleus | 43.7 | 44.83 |
| GSMUA_Achr11P... | Banana | nucleus | 39.5 | 43.93 |
| GSMUA_Achr10P... | Banana | cytosol | 42.86 | 43.22 |
| CDY14087 | Canola | plastid | 48.74 | 42.96 |
| CDY04984 | Canola | plastid | 48.74 | 42.96 |
| GSMUA_Achr8P16130_001 | Banana | cytosol | 36.97 | 42.72 |
| Solyc10g083140.1.1 | Tomato | plastid | 24.37 | 42.65 |
| Zm00001d001776_P001 | Maize | cytosol, plastid | 28.57 | 42.5 |
| TraesCS2D01G379500.1 | Wheat | cytosol | 28.57 | 41.46 |
| TraesCS2A01G383200.1 | Wheat | cytosol | 28.57 | 41.46 |
| Os08t0102250-00 | Rice | cytosol | 23.53 | 41.18 |
| TraesCS2B01G400400.1 | Wheat | cytosol | 28.57 | 40.96 |
| HORVU2Hr1G089140.1 | Barley | cytosol | 28.57 | 40.96 |
| Os04t0684600-01 | Rice | cytosol | 27.73 | 40.74 |
| Zm00001d025361_P001 | Maize | nucleus | 36.97 | 39.64 |
| TraesCS2D01G597400.1 | Wheat | cytosol, plastid | 26.89 | 37.65 |
| TraesCS1D01G275300.1 | Wheat | nucleus | 42.02 | 37.59 |
| TraesCS2A01G296600.1 | Wheat | cytosol | 36.13 | 37.39 |
| TraesCS2B01G312800.1 | Wheat | cytosol | 36.13 | 37.39 |
| TraesCS2D01G294500.1 | Wheat | cytosol | 36.13 | 37.39 |
| TraesCS4B01G346800.1 | Wheat | plastid | 36.13 | 37.39 |
| EES10769 | Sorghum | mitochondrion | 36.13 | 37.39 |
| TraesCS1A01G275700.1 | Wheat | plastid | 42.02 | 37.31 |
| EES11682 | Sorghum | cytosol, plastid | 29.41 | 37.23 |
| HORVU3Hr1G083720.1 | Barley | plastid | 38.66 | 36.51 |
| TraesCS3D01G368200.1 | Wheat | plastid | 38.66 | 36.51 |
| Os01t0863500-01 | Rice | plastid | 39.5 | 36.43 |
| TraesCS3A01G375700.1 | Wheat | plastid | 38.66 | 36.22 |
| TraesCS3B01G407900.1 | Wheat | plastid | 38.66 | 36.22 |
| Os04t0415000-01 | Rice | cytosol | 35.29 | 36.21 |
| GSMUA_Achr6P07030_001 | Banana | cytosol, plastid | 37.82 | 36.0 |
| Zm00001d038287_P001 | Maize | mitochondrion | 39.5 | 35.88 |
| Zm00001d042754_P001 | Maize | mitochondrion, plastid | 36.97 | 35.77 |
| Os05t0442000-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 39.5 | 35.61 |
| OQU87905 | Sorghum | mitochondrion, plastid | 35.29 | 35.59 |
| Os02t0536500-01 | Rice | mitochondrion | 35.29 | 34.15 |
| GSMUA_Achr9P02640_001 | Banana | cytosol | 32.77 | 33.05 |
| Zm00001d003763_P001 | Maize | cytosol | 36.13 | 32.82 |
| EES05192 | Sorghum | nucleus, plastid | 39.5 | 32.64 |
| HORVU1Hr1G074000.6 | Barley | mitochondrion | 42.02 | 30.86 |
| HORVU2Hr1G073380.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 36.13 | 30.5 |
| Zm00001d016743_P001 | Maize | nucleus | 37.82 | 30.0 |
| TraesCS1B01G284900.1 | Wheat | extracellular, plastid, vacuole | 42.02 | 27.32 |
| VIT_08s0007g02600.t01 | Wine grape | plastid | 49.58 | 27.06 |
| EES19598 | Sorghum | cytosol, plastid | 39.5 | 25.68 |
| GSMUA_Achr6P12990_001 | Banana | nucleus | 31.93 | 18.63 |
Protein Annotations
| EnsemblPlants:Solyc06g073990.1.1 | EnsemblPlantsGene:Solyc06g073990.1 | PANTHER:PTHR33177 | PANTHER:PTHR33177:SF8 | SEG:seg | UniParc:UPI0002766198 |
| UniProt:K4C9B7 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:45736521..45736880
Molecular Weight (calculated)
13509.1 Da
IEP (calculated)
7.849
GRAVY (calculated)
-0.685
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MNYRRESIHD PKLDLKLNLS PPRENNNMFP ILSPSRSSSS YTSSMERSPA SSCVSREPTP DHQEFFGSPE ATTTSMMLVG CPRCLMYVML SAEDPKCPKC
101: KSSVLLDFFR EDRINNPKN
101: KSSVLLDFFR EDRINNPKN
001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN
101: TTATAANTRR KKKTWWN
Arabidopsis Description
E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.