CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G06270.1	Thale cress	mitochondrion, plastid	77.78	86.07
CDY64732	Canola	plastid	76.3	83.74
CDY47258	Canola	plastid	74.81	83.47
CDY04984	Canola	plastid	82.96	82.96
CDX80998	Canola	plastid	73.33	81.82
KRH67976	Soybean	nucleus, plastid	54.81	67.89
KRG96232	Soybean	nucleus, plastid	54.81	67.89
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	22.96	62.0
CDY08510	Canola	nucleus, plastid	54.07	61.86
CDY01039	Canola	mitochondrion, nucleus	53.33	61.02
CDX73863	Canola	plastid	53.33	60.5
GSMUA_Achr11P...	Banana	nucleus	42.22	53.27
Os04t0415000-01	Rice	cytosol	44.44	51.72
Zm00001d025361_P001	Maize	nucleus	42.22	51.35
TraesCS2A01G296600.1	Wheat	cytosol	43.7	51.3
TraesCS2B01G312800.1	Wheat	cytosol	43.7	51.3
TraesCS2D01G294500.1	Wheat	cytosol	43.7	51.3
TraesCS4B01G346800.1	Wheat	plastid	43.7	51.3
GSMUA_Achr10P...	Banana	cytosol	44.44	50.85
TraesCS2D01G379500.1	Wheat	cytosol	30.37	50.0
EES10769	Sorghum	mitochondrion	42.22	49.57
TraesCS2B01G400400.1	Wheat	cytosol	30.37	49.4
TraesCS7D01G324300.1	Wheat	cytosol	23.7	49.23
TraesCS2A01G383200.1	Wheat	cytosol	29.63	48.78
Solyc06g073990.1.1	Tomato	nucleus, plastid	42.96	48.74
GSMUA_Achr8P16130_001	Banana	cytosol	36.3	47.57
GSMUA_Achr6P19430_001	Banana	nucleus	40.74	47.41
PGSC0003DMT400015190	Potato	nucleus, plastid	42.96	47.15
HORVU2Hr1G089140.1	Barley	cytosol	28.89	46.99
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	42.96	46.4
TraesCS2D01G597400.1	Wheat	cytosol, plastid	28.89	45.88
Os04t0684600-01	Rice	cytosol	27.41	45.68
Zm00001d001776_P001	Maize	cytosol, plastid	26.67	45.0
Os08t0102250-00	Rice	cytosol	22.22	44.12
PGSC0003DMT400050486	Potato	cytosol, plastid	38.52	44.07
Zm00001d003763_P001	Maize	cytosol	41.48	42.75
Os02t0536500-01	Rice	mitochondrion	38.52	42.28
EES11682	Sorghum	cytosol, plastid	28.89	41.49
TraesCS3D01G368200.1	Wheat	plastid	38.52	41.27
TraesCS3B01G407900.1	Wheat	plastid	38.52	40.94
GSMUA_Achr9P02640_001	Banana	cytosol	35.56	40.68
HORVU3Hr1G083720.1	Barley	plastid	37.78	40.48
Zm00001d038287_P001	Maize	mitochondrion	39.26	40.46
Os01t0863500-01	Rice	plastid	38.52	40.31
TraesCS3A01G375700.1	Wheat	plastid	37.78	40.16
Zm00001d042754_P001	Maize	mitochondrion, plastid	36.3	39.84
TraesCS1D01G275300.1	Wheat	nucleus	38.52	39.1
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	40.74	39.01
TraesCS1A01G275700.1	Wheat	plastid	38.52	38.81
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	37.78	38.64
EES05192	Sorghum	nucleus, plastid	40.0	37.5
Zm00001d016743_P001	Maize	nucleus	41.48	37.33
OQU87905	Sorghum	mitochondrion, plastid	32.59	37.29
VIT_08s0007g02600.t01	Wine grape	plastid	58.52	36.24
HORVU1Hr1G074000.6	Barley	mitochondrion	37.78	31.48
EES19598	Sorghum	cytosol, plastid	41.48	30.6
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	40.74	30.05
GSMUA_Achr6P12990_001	Banana	nucleus	35.56	23.53

Protein Annotations

EnsemblPlants:CDY14087	EnsemblPlantsGene:GSBRNA2T00078625001	PANTHER:PTHR33177	PANTHER:PTHR33177:SF8	ProteinID:CDY14087	ProteinID:CDY14087.1
SEG:seg	UniParc:UPI0004EDE81F	UniProt:A0A078FMC3	MapMan:35.2	:	:

Description

BnaC02g02040DBnaC02g02040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMC3]

Coordinates

chrLK032040:-:372882..374261

Molecular Weight (calculated)

15010.9 Da

IEP (calculated)

10.398

GRAVY (calculated)

-0.705

Length

135 amino acids

Sequence
(BLAST)

001: MNCIPVHIYR FSRKMSRRSP KLELKLNLSP STSSRRRMVR SPSRSATTSP TSPQSSCVSS EMNQDESSLR YSTSPEATSM VLVGCPRCLM YVMLSQDDPK
101: CPKCKSTVLL DFNHENASNA NASADASSGR KTRRN

Best Arabidopsis Sequence Match ( AT5G06270.2 )
(BLAST)

001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.