Factsheet for TraesCS2B01G400400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G379500.1	Wheat	cytosol	96.39	97.56
TraesCS2A01G383200.1	Wheat	cytosol	96.39	97.56
HORVU2Hr1G089140.1	Barley	cytosol	89.16	89.16
Os04t0684600-01	Rice	cytosol	74.7	76.54
Zm00001d001776_P001	Maize	cytosol, plastid	57.83	60.0
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	32.53	54.0
EES11682	Sorghum	cytosol, plastid	55.42	48.94
Solyc10g083140.1.1	Tomato	plastid	34.94	42.65
KRG96232	Soybean	nucleus, plastid	49.4	37.61
KRH67976	Soybean	nucleus, plastid	48.19	36.7
AT5G06270.1	Thale cress	mitochondrion, plastid	51.81	35.25
KRH22649	Soybean	cytosol	27.71	34.33
Bra005888.1-P	Field mustard	plastid	49.4	33.88
CDY47258	Canola	plastid	49.4	33.88
CDX80998	Canola	plastid	48.19	33.06
KRH30377	Soybean	plastid	43.37	32.73
AT3G11600.1	Thale cress	plastid	45.78	32.48
Bra028737.1-P	Field mustard	plastid	46.99	32.23
PGSC0003DMT400072576	Potato	plastid	40.96	32.08
Bra038666.1-P	Field mustard	plastid	44.58	31.9
Bra009178.1-P	Field mustard	plastid	46.99	31.71
CDY64732	Canola	plastid	46.99	31.71
GSMUA_Achr10P...	Banana	cytosol	44.58	31.36
CDX73863	Canola	plastid	44.58	31.09
Bra001413.1-P	Field mustard	plastid	44.58	31.09
GSMUA_Achr6P19430_001	Banana	nucleus	43.37	31.03
CDY08510	Canola	nucleus, plastid	43.37	30.51
Bra034826.1-P	Field mustard	plastid	43.37	30.51
CDY01039	Canola	mitochondrion, nucleus	43.37	30.51
CDY14087	Canola	plastid	49.4	30.37
TraesCS3B01G407900.1	Wheat	plastid	45.78	29.92
KRH22650	Soybean	cytosol, plastid	38.55	29.91
KRH25293	Soybean	plastid	38.55	29.36
CDY04984	Canola	plastid	46.99	28.89
TraesCS2B01G312800.1	Wheat	cytosol	39.76	28.7
TraesCS4B01G346800.1	Wheat	plastid	39.76	28.7
Solyc06g073990.1.1	Tomato	nucleus, plastid	40.96	28.57
KRH26665	Soybean	plastid	33.73	27.18
PGSC0003DMT400050486	Potato	cytosol, plastid	37.35	26.27
PGSC0003DMT400015190	Potato	nucleus, plastid	38.55	26.02
KRH26666	Soybean	cytosol	34.94	25.66
Solyc01g007870.2.1	Tomato	nucleus	38.55	25.4
PGSC0003DMT400042213	Potato	cytosol	39.76	25.0
KRH26667	Soybean	nucleus, plastid	33.73	25.0
KRH22648	Soybean	nucleus, plastid	36.14	24.79
VIT_08s0007g02600.t01	Wine grape	plastid	48.19	18.35
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	39.76	18.03

Protein Annotations

EnsemblPlants:TraesCS2B01G400400.1

EnsemblPlantsGene:TraesCS2B01G400400

PANTHER:PTHR33177

PANTHER:PTHR33177:SF20

SEG:seg

MapMan:35.2

Description

No Description!

Coordinates

chr2B:+:568744875..568745126

Molecular Weight (calculated)

8610.3 Da

IEP (calculated)

6.478

GRAVY (calculated)

-0.008

Length

83 amino acids

Sequence
(BLAST)

1: MASTVESPTS SCVSSDTEEE AAAVTKPMVV VGCPQCLMYV MLSGAAEEQP RCPRCKSPVL LHFLHGAAAA AAASTNRQQP SKS

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.