CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
plasma membrane 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001413.1-P	Field mustard	plastid	100.0	100.0
AT3G11600.1	Thale cress	plastid	79.83	81.2
CDY08510	Canola	nucleus, plastid	75.63	76.27
CDY01039	Canola	mitochondrion, nucleus	74.79	75.42
KRG96232	Soybean	nucleus, plastid	55.46	60.55
KRH67976	Soybean	nucleus, plastid	55.46	60.55
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	25.21	60.0
CDY47258	Canola	plastid	59.66	58.68
CDY64732	Canola	plastid	60.5	58.54
CDX80998	Canola	plastid	57.98	57.02
CDY14087	Canola	plastid	60.5	53.33
CDY04984	Canola	plastid	58.82	51.85
Solyc06g073990.1.1	Tomato	nucleus, plastid	49.58	49.58
GSMUA_Achr8P16130_001	Banana	cytosol	42.86	49.51
TraesCS7D01G324300.1	Wheat	cytosol	26.05	47.69
GSMUA_Achr11P...	Banana	nucleus	42.86	47.66
TraesCS2A01G383200.1	Wheat	cytosol	32.77	47.56
TraesCS2D01G379500.1	Wheat	cytosol	31.93	46.34
Zm00001d001776_P001	Maize	cytosol, plastid	31.09	46.25
PGSC0003DMT400015190	Potato	nucleus, plastid	47.06	45.53
TraesCS2B01G400400.1	Wheat	cytosol	31.09	44.58
HORVU2Hr1G089140.1	Barley	cytosol	30.25	43.37
Os04t0684600-01	Rice	cytosol	29.41	43.21
GSMUA_Achr10P...	Banana	cytosol	42.02	42.37
Zm00001d038287_P001	Maize	mitochondrion	46.22	41.98
EES10769	Sorghum	mitochondrion	40.34	41.74
Zm00001d025361_P001	Maize	nucleus	38.66	41.44
Os04t0415000-01	Rice	cytosol	40.34	41.38
Os08t0102250-00	Rice	cytosol	23.53	41.18
TraesCS4B01G346800.1	Wheat	plastid	39.5	40.87
TraesCS2D01G294500.1	Wheat	cytosol	39.5	40.87
TraesCS2B01G312800.1	Wheat	cytosol	39.5	40.87
TraesCS2A01G296600.1	Wheat	cytosol	39.5	40.87
PGSC0003DMT400050486	Potato	cytosol, plastid	40.34	40.68
EES11682	Sorghum	cytosol, plastid	31.93	40.43
TraesCS2D01G597400.1	Wheat	cytosol, plastid	28.57	40.0
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	42.02	40.0
GSMUA_Achr6P19430_001	Banana	nucleus	38.66	39.66
TraesCS1D01G275300.1	Wheat	nucleus	43.7	39.1
TraesCS1A01G275700.1	Wheat	plastid	43.7	38.81
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	42.02	37.88
HORVU3Hr1G083720.1	Barley	plastid	39.5	37.3
TraesCS3D01G368200.1	Wheat	plastid	39.5	37.3
TraesCS3B01G407900.1	Wheat	plastid	39.5	37.01
Os01t0863500-01	Rice	plastid	39.5	36.43
TraesCS3A01G375700.1	Wheat	plastid	38.66	36.22
Zm00001d003763_P001	Maize	cytosol	38.66	35.11
Zm00001d042754_P001	Maize	mitochondrion, plastid	36.13	34.96
Os02t0536500-01	Rice	mitochondrion	36.13	34.96
GSMUA_Achr9P02640_001	Banana	cytosol	33.61	33.9
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	39.5	33.33
HORVU1Hr1G074000.6	Barley	mitochondrion	43.7	32.1
EES05192	Sorghum	nucleus, plastid	38.66	31.94
VIT_08s0007g02600.t01	Wine grape	plastid	57.98	31.65
OQU87905	Sorghum	mitochondrion, plastid	31.09	31.36
Zm00001d016743_P001	Maize	nucleus	38.66	30.67
EES19598	Sorghum	cytosol, plastid	45.38	29.51
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	43.7	28.42
GSMUA_Achr6P12990_001	Banana	nucleus	30.25	17.65

Protein Annotations

EnsemblPlants:CDX73863	EnsemblPlantsGene:GSBRNA2T00111571001	PANTHER:PTHR33177	PANTHER:PTHR33177:SF8	ProteinID:CDX73863	ProteinID:CDX73863.1
SEG:seg	UniParc:UPI0000E649D3	MapMan:35.2	:	:	:

Description

BnaA03g31840D

Coordinates

chrLK031800:-:261647..262006

Molecular Weight (calculated)

13287.1 Da

IEP (calculated)

8.494

GRAVY (calculated)

-0.324

Length

119 amino acids

Sequence
(BLAST)

001: MSLRNKNGPK LELKLNLSPP PSQANLMSLV RSPSRSNTTS PSSCVSSETY QEEMETTISM LLVGCPRCLM YVMLSQDDPK CPKCKSTVLL DFLHQDVSAA
101: TTAPADITKR NKTWWNFFV

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.