CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034826.1-P	Field mustard	plastid	98.31	98.31
CDY01039	Canola	mitochondrion, nucleus	96.61	96.61
CDX73863	Canola	plastid	76.27	75.63
AT3G11600.1	Thale cress	plastid	72.88	73.5
KRG96232	Soybean	nucleus, plastid	57.63	62.39
KRH67976	Soybean	nucleus, plastid	57.63	62.39
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	26.27	62.0
CDY47258	Canola	plastid	60.17	58.68
CDY64732	Canola	plastid	61.02	58.54
CDX80998	Canola	plastid	56.78	55.37
CDY14087	Canola	plastid	61.86	54.07
CDY04984	Canola	plastid	61.02	53.33
Solyc06g073990.1.1	Tomato	nucleus, plastid	48.31	47.9
TraesCS7D01G324300.1	Wheat	cytosol	26.27	47.69
GSMUA_Achr8P16130_001	Banana	cytosol	41.53	47.57
GSMUA_Achr11P...	Banana	nucleus	41.53	45.79
Zm00001d001776_P001	Maize	cytosol, plastid	30.51	45.0
Os08t0102250-00	Rice	cytosol	25.42	44.12
PGSC0003DMT400015190	Potato	nucleus, plastid	45.76	43.9
TraesCS2D01G379500.1	Wheat	cytosol	30.51	43.9
TraesCS2B01G400400.1	Wheat	cytosol	30.51	43.37
PGSC0003DMT400050486	Potato	cytosol, plastid	43.22	43.22
TraesCS2A01G383200.1	Wheat	cytosol	29.66	42.68
GSMUA_Achr10P...	Banana	cytosol	42.37	42.37
HORVU2Hr1G089140.1	Barley	cytosol	29.66	42.17
Os04t0684600-01	Rice	cytosol	28.81	41.98
TraesCS4B01G346800.1	Wheat	plastid	40.68	41.74
TraesCS2D01G294500.1	Wheat	cytosol	40.68	41.74
TraesCS2B01G312800.1	Wheat	cytosol	40.68	41.74
TraesCS2A01G296600.1	Wheat	cytosol	40.68	41.74
Zm00001d025361_P001	Maize	nucleus	38.98	41.44
Zm00001d038287_P001	Maize	mitochondrion	45.76	41.22
TraesCS1D01G275300.1	Wheat	nucleus	45.76	40.6
EES11682	Sorghum	cytosol, plastid	32.2	40.43
TraesCS1A01G275700.1	Wheat	plastid	45.76	40.3
EES10769	Sorghum	mitochondrion	38.98	40.0
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	42.37	40.0
Os04t0415000-01	Rice	cytosol	38.98	39.66
GSMUA_Achr6P19430_001	Banana	nucleus	38.98	39.66
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	44.07	39.39
TraesCS2D01G597400.1	Wheat	cytosol, plastid	27.97	38.82
GSMUA_Achr9P02640_001	Banana	cytosol	38.14	38.14
TraesCS3D01G368200.1	Wheat	plastid	40.68	38.1
HORVU3Hr1G083720.1	Barley	plastid	40.68	38.1
TraesCS3B01G407900.1	Wheat	plastid	40.68	37.8
TraesCS3A01G375700.1	Wheat	plastid	39.83	37.01
Zm00001d042754_P001	Maize	mitochondrion, plastid	38.14	36.59
Os01t0863500-01	Rice	plastid	39.83	36.43
Zm00001d003763_P001	Maize	cytosol	38.98	35.11
Os02t0536500-01	Rice	mitochondrion	34.75	33.33
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	39.83	33.33
OQU87905	Sorghum	mitochondrion, plastid	32.2	32.2
HORVU1Hr1G074000.6	Barley	mitochondrion	44.07	32.1
Zm00001d016743_P001	Maize	nucleus	39.83	31.33
EES05192	Sorghum	nucleus, plastid	38.14	31.25
VIT_08s0007g02600.t01	Wine grape	plastid	57.63	31.19
EES19598	Sorghum	cytosol, plastid	46.61	30.05
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	45.76	29.51
GSMUA_Achr6P12990_001	Banana	nucleus	29.66	17.16

Protein Annotations

EnsemblPlants:CDY08510	EnsemblPlantsGene:GSBRNA2T00000284001	PANTHER:PTHR33177	PANTHER:PTHR33177:SF8	ProteinID:CDY08510	ProteinID:CDY08510.1
UniParc:UPI0000E649D5	UniProt:A0A078F242	MapMan:35.2	:	:	:

Description

BnaA05g27460DBnaA05g27460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F242]

Coordinates

chrLK031986:-:489118..489683

Molecular Weight (calculated)

12988.7 Da

IEP (calculated)

8.502

GRAVY (calculated)

-0.483

Length

118 amino acids

Sequence
(BLAST)

001: MSRRNRSGPK LELKLNLSPP PSQGEQMSMV RSPSRSNTAS PNSCVSSEPS QEEMETPISM VLVGCPRCLM YVMLSQDEPK CPKCKSTVLL DFFHENASVD
101: TTAPAVTTKR NKSLITNI

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.