Factsheet for TraesCS2D01G597400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G379500.1	Wheat	cytosol	61.18	63.41
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	36.47	62.0
TraesCS7D01G324300.1	Wheat	cytosol	44.71	58.46
Os04t0684600-01	Rice	cytosol	52.94	55.56
Zm00001d001776_P001	Maize	cytosol, plastid	42.35	45.0
EES11682	Sorghum	cytosol, plastid	47.06	42.55
Solyc10g083140.1.1	Tomato	plastid	31.76	39.71
KRH67976	Soybean	nucleus, plastid	43.53	33.95
KRG96232	Soybean	nucleus, plastid	43.53	33.95
CDX80998	Canola	plastid	48.24	33.88
AT5G06270.1	Thale cress	mitochondrion, plastid	48.24	33.61
KRH22649	Soybean	cytosol	25.88	32.84
GSMUA_Achr6P19430_001	Banana	nucleus	44.71	32.76
Bra005888.1-P	Field mustard	plastid	45.88	32.23
Bra028737.1-P	Field mustard	plastid	45.88	32.23
CDY64732	Canola	plastid	45.88	31.71
Bra009178.1-P	Field mustard	plastid	45.88	31.71
CDY47258	Canola	plastid	44.71	31.41
TraesCS3D01G368200.1	Wheat	plastid	45.88	30.95
KRH30377	Soybean	plastid	40.0	30.91
GSMUA_Achr10P...	Banana	cytosol	42.35	30.51
KRH25293	Soybean	plastid	38.82	30.28
AT3G11600.1	Thale cress	plastid	41.18	29.91
TraesCS2D01G294500.1	Wheat	cytosol	40.0	29.57
Bra038666.1-P	Field mustard	plastid	40.0	29.31
CDY04984	Canola	plastid	45.88	28.89
CDY14087	Canola	plastid	45.88	28.89
Bra001413.1-P	Field mustard	plastid	40.0	28.57
CDX73863	Canola	plastid	40.0	28.57
CDY08510	Canola	nucleus, plastid	38.82	27.97
Bra034826.1-P	Field mustard	plastid	38.82	27.97
CDY01039	Canola	mitochondrion, nucleus	38.82	27.97
PGSC0003DMT400072576	Potato	plastid	34.12	27.36
KRH22650	Soybean	cytosol, plastid	34.12	27.1
Solyc06g073990.1.1	Tomato	nucleus, plastid	37.65	26.89
PGSC0003DMT400050486	Potato	cytosol, plastid	36.47	26.27
PGSC0003DMT400015190	Potato	nucleus, plastid	35.29	24.39
KRH26665	Soybean	plastid	29.41	24.27
TraesCS1D01G275300.1	Wheat	nucleus	37.65	24.06
Solyc01g007870.2.1	Tomato	nucleus	35.29	23.81
KRH26667	Soybean	nucleus, plastid	30.59	23.21
PGSC0003DMT400042213	Potato	cytosol	35.29	22.73
KRH22648	Soybean	nucleus, plastid	31.76	22.31
KRH26666	Soybean	cytosol	29.41	22.12
VIT_08s0007g02600.t01	Wine grape	plastid	47.06	18.35

Protein Annotations

EnsemblPlants:TraesCS2D01G597400.1

EnsemblPlantsGene:TraesCS2D01G597400

PANTHER:PTHR33177

PANTHER:PTHR33177:SF20

SEG:seg

MapMan:35.2

Description

No Description!

Coordinates

chr2D:-:649812153..649812410

Molecular Weight (calculated)

8876.5 Da

IEP (calculated)

5.733

GRAVY (calculated)

-0.266

Length

85 amino acids

Sequence
(BLAST)

1: MASMARSPAS SCVSSDEEEA AAAKPMVVAG CPRCLMYVML SSEPPRCPRC NSPVLLQFLH GADTNTNAAA AADANTNTNR QDSKS

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.