Factsheet for Bra028737.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009178.1-P	Field mustard	plastid	90.91	89.43
AT5G06270.1	Thale cress	mitochondrion, plastid	90.08	89.34
CDY04984	Canola	plastid	95.87	85.93
Bra005888.1-P	Field mustard	plastid	84.3	84.3
KRG96232	Soybean	nucleus, plastid	64.46	71.56
KRH67976	Soybean	nucleus, plastid	64.46	71.56
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	26.45	64.0
Bra038666.1-P	Field mustard	plastid	60.33	62.93
Bra034826.1-P	Field mustard	plastid	58.68	60.17
Bra001413.1-P	Field mustard	plastid	57.85	58.82
TraesCS2B01G312800.1	Wheat	cytosol	47.11	49.57
TraesCS2A01G296600.1	Wheat	cytosol	47.11	49.57
TraesCS2D01G294500.1	Wheat	cytosol	47.11	49.57
TraesCS4B01G346800.1	Wheat	plastid	47.11	49.57
Zm00001d025361_P001	Maize	nucleus	45.45	49.55
GSMUA_Achr10P...	Banana	cytosol	47.93	49.15
Os04t0415000-01	Rice	cytosol	47.11	49.14
Solyc06g073990.1.1	Tomato	nucleus, plastid	47.93	48.74
GSMUA_Achr11P...	Banana	nucleus	42.98	48.6
EES10769	Sorghum	mitochondrion	45.45	47.83
TraesCS2D01G379500.1	Wheat	cytosol	32.23	47.56
GSMUA_Achr6P19430_001	Banana	nucleus	45.45	47.41
PGSC0003DMT400015190	Potato	nucleus, plastid	47.93	47.15
TraesCS2B01G400400.1	Wheat	cytosol	32.23	46.99
GSMUA_Achr8P16130_001	Banana	cytosol	39.67	46.6
TraesCS2A01G383200.1	Wheat	cytosol	31.41	46.34
TraesCS7D01G324300.1	Wheat	cytosol	24.79	46.15
TraesCS2D01G597400.1	Wheat	cytosol, plastid	32.23	45.88
HORVU2Hr1G089140.1	Barley	cytosol	30.58	44.58
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	45.45	44.0
PGSC0003DMT400050486	Potato	cytosol, plastid	42.15	43.22
Os04t0684600-01	Rice	cytosol	28.93	43.21
Os08t0102250-00	Rice	cytosol	23.97	42.65
Zm00001d001776_P001	Maize	cytosol, plastid	28.1	42.5
Os02t0536500-01	Rice	mitochondrion	42.98	42.28
GSMUA_Achr9P02640_001	Banana	cytosol	40.5	41.53
TraesCS3D01G368200.1	Wheat	plastid	42.98	41.27
Zm00001d003763_P001	Maize	cytosol	44.63	41.22
TraesCS3B01G407900.1	Wheat	plastid	42.98	40.94
HORVU3Hr1G083720.1	Barley	plastid	42.15	40.48
Zm00001d038287_P001	Maize	mitochondrion	43.8	40.46
Os01t0863500-01	Rice	plastid	42.98	40.31
TraesCS3A01G375700.1	Wheat	plastid	42.15	40.16
Zm00001d042754_P001	Maize	mitochondrion, plastid	40.5	39.84
EES11682	Sorghum	cytosol, plastid	30.58	39.36
TraesCS1A01G275700.1	Wheat	plastid	42.98	38.81
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	42.15	38.64
TraesCS1D01G275300.1	Wheat	nucleus	42.15	38.35
VIT_08s0007g02600.t01	Wine grape	plastid	67.77	37.61
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	43.8	37.59
EES05192	Sorghum	nucleus, plastid	44.63	37.5
OQU87905	Sorghum	mitochondrion, plastid	36.36	37.29
Zm00001d016743_P001	Maize	nucleus	45.45	36.67
HORVU1Hr1G074000.6	Barley	mitochondrion	40.5	30.25
EES19598	Sorghum	cytosol, plastid	43.8	28.96
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	42.15	27.87
GSMUA_Achr6P12990_001	Banana	nucleus	38.02	22.55

Protein Annotations

EnsemblPlants:Bra028737.1	EnsemblPlants:Bra028737.1-P	EnsemblPlantsGene:Bra028737	PANTHER:PTHR33177	PANTHER:PTHR33177:SF8	SEG:seg
UniParc:UPI000254317C	UniProt:M4EIX2	MapMan:35.2	:	:	:

Description

AT5G06270 (E=6e-033) | unknown protein

Coordinates

chrA02:+:2308173..2308538

Molecular Weight (calculated)

13289.7 Da

IEP (calculated)

9.466

GRAVY (calculated)

-0.765

Length

121 amino acids

Sequence
(BLAST)

001: MSRRSPKLEL KLNLSPSTSS RRRMVRSPSR SATTSPTSPQ SSCVSTEMNQ DESSLRYSTS PEATSMVLVG CPRCLMYVML SEDDPKCPKC QSTVLLDFNH
101: ENASNANAPA DASSGRKTRR N

Best Arabidopsis Sequence Match ( AT5G06270.2 )
(BLAST)

001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.