Factsheet for HORVU1Hr1G074000.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G275700.1	Wheat	plastid	70.37	85.07
TraesCS1D01G275300.1	Wheat	nucleus	68.52	83.46
HORVU3Hr1G083720.1	Barley	plastid	48.77	62.7
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	18.52	60.0
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	67.28	59.56
KRG96232	Soybean	nucleus, plastid	32.72	48.62
KRH67976	Soybean	nucleus, plastid	32.72	48.62
KRH30377	Soybean	plastid	30.86	45.45
Bra034826.1-P	Field mustard	plastid	32.72	44.92
Solyc10g083140.1.1	Tomato	plastid	18.52	44.12
CDY08510	Canola	nucleus, plastid	32.1	44.07
KRH25293	Soybean	plastid	29.63	44.04
GSMUA_Achr6P19430_001	Banana	nucleus	31.48	43.97
Bra038666.1-P	Field mustard	plastid	31.48	43.97
CDX73863	Canola	plastid	32.1	43.7
Bra001413.1-P	Field mustard	plastid	32.1	43.7
AT3G11600.1	Thale cress	plastid	31.48	43.59
CDY01039	Canola	mitochondrion, nucleus	31.48	43.22
KRH22650	Soybean	cytosol, plastid	27.78	42.06
Solyc06g073990.1.1	Tomato	nucleus, plastid	30.86	42.02
CDY64732	Canola	plastid	31.48	41.46
Bra009178.1-P	Field mustard	plastid	31.48	41.46
CDY47258	Canola	plastid	30.86	41.32
CDX80998	Canola	plastid	30.86	41.32
AT5G06270.1	Thale cress	mitochondrion, plastid	30.86	40.98
GSMUA_Achr10P...	Banana	cytosol	29.63	40.68
PGSC0003DMT400050486	Potato	cytosol, plastid	29.63	40.68
PGSC0003DMT400072576	Potato	plastid	26.54	40.57
Bra005888.1-P	Field mustard	plastid	30.25	40.5
Bra028737.1-P	Field mustard	plastid	30.25	40.5
KRH22649	Soybean	cytosol	16.67	40.3
PGSC0003DMT400015190	Potato	nucleus, plastid	30.25	39.84
Solyc01g007870.2.1	Tomato	nucleus	30.86	39.68
HORVU2Hr1G089140.1	Barley	cytosol	19.75	38.55
CDY14087	Canola	plastid	31.48	37.78
KRH22648	Soybean	nucleus, plastid	27.16	36.36
CDY04984	Canola	plastid	30.25	36.3
KRH26667	Soybean	nucleus, plastid	24.69	35.71
PGSC0003DMT400042213	Potato	cytosol	29.01	35.61
KRH26665	Soybean	plastid	22.22	34.95
KRH26666	Soybean	cytosol	24.07	34.51
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	25.93	29.79
VIT_08s0007g02600.t01	Wine grape	plastid	33.33	24.77

Protein Annotations

EnsemblPlants:HORVU1Hr1G074000.6	EnsemblPlantsGene:HORVU1Hr1G074000	PANTHER:PTHR33177	PANTHER:PTHR33177:SF10	SEG:seg	UniParc:UPI000B483948
UniProt:A0A287G8D3	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:506256495..506257533

Molecular Weight (calculated)

16654.7 Da

IEP (calculated)

11.108

GRAVY (calculated)

-0.659

Length

162 amino acids

Sequence
(BLAST)

001: HPHISFTYTF RATRRRVAST YSKGKCRVNL KMSRNNGKGP KLDLRLSFSR SRGGGGGGGG GPSAAPPPGG SNSPRRMSSS SSSSASPPSS CVSSEGSPEA
101: GGGSGGSAMI LAGCPRCMMY VMLSREDPKC PKCHSTVLLD FNDDHRNAAG FGSGKVGKGK RG

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.