CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26666	Soybean	cytosol	52.68	52.21
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	22.32	50.0
KRH22649	Soybean	cytosol	29.46	49.25
KRH22648	Soybean	nucleus, plastid	50.89	47.11
KRH25293	Soybean	plastid	41.96	43.12
KRH30377	Soybean	plastid	41.96	42.73
TraesCS7D01G324300.1	Wheat	cytosol	24.11	41.54
KRH67976	Soybean	nucleus, plastid	38.39	39.45
KRG96232	Soybean	nucleus, plastid	38.39	39.45
GSMUA_Achr11P...	Banana	nucleus	35.71	37.38
KRH22650	Soybean	cytosol, plastid	35.71	37.38
Os08t0102250-00	Rice	cytosol	22.32	36.76
Zm00001d001776_P001	Maize	cytosol, plastid	25.0	35.0
TraesCS2D01G379500.1	Wheat	cytosol	25.0	34.15
TraesCS2A01G383200.1	Wheat	cytosol	25.0	34.15
EES11682	Sorghum	cytosol, plastid	28.57	34.04
HORVU2Hr1G089140.1	Barley	cytosol	25.0	33.73
TraesCS2B01G400400.1	Wheat	cytosol	25.0	33.73
GSMUA_Achr6P19430_001	Banana	nucleus	34.82	33.62
Os04t0684600-01	Rice	cytosol	24.11	33.33
GSMUA_Achr8P16130_001	Banana	cytosol	30.36	33.01
KRH26665	Soybean	plastid	29.46	32.04
GSMUA_Achr10P...	Banana	cytosol	33.04	31.36
Zm00001d025361_P001	Maize	nucleus	30.36	30.63
TraesCS2D01G597400.1	Wheat	cytosol, plastid	23.21	30.59
TraesCS4B01G346800.1	Wheat	plastid	31.25	30.43
TraesCS2A01G296600.1	Wheat	cytosol	31.25	30.43
TraesCS2B01G312800.1	Wheat	cytosol	31.25	30.43
TraesCS2D01G294500.1	Wheat	cytosol	31.25	30.43
Os04t0415000-01	Rice	cytosol	31.25	30.17
TraesCS1D01G275300.1	Wheat	nucleus	35.71	30.08
TraesCS1A01G275700.1	Wheat	plastid	35.71	29.85
EES10769	Sorghum	mitochondrion	30.36	29.57
Os02t0536500-01	Rice	mitochondrion	32.14	29.27
EES05192	Sorghum	nucleus, plastid	37.5	29.17
GSMUA_Achr9P02640_001	Banana	cytosol	30.36	28.81
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	32.14	28.8
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	33.93	28.79
Zm00001d038287_P001	Maize	mitochondrion	33.04	28.24
TraesCS3D01G368200.1	Wheat	plastid	31.25	27.78
HORVU3Hr1G083720.1	Barley	plastid	31.25	27.78
Zm00001d042754_P001	Maize	mitochondrion, plastid	30.36	27.64
TraesCS3A01G375700.1	Wheat	plastid	31.25	27.56
TraesCS3B01G407900.1	Wheat	plastid	31.25	27.56
Os01t0863500-01	Rice	plastid	31.25	27.13
OQU87905	Sorghum	mitochondrion, plastid	28.57	27.12
Zm00001d003763_P001	Maize	cytosol	30.36	25.95
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	32.14	25.53
HORVU1Hr1G074000.6	Barley	mitochondrion	35.71	24.69
Zm00001d016743_P001	Maize	nucleus	32.14	24.0
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	35.71	21.86
EES19598	Sorghum	cytosol, plastid	33.04	20.22
GSMUA_Achr6P12990_001	Banana	nucleus	30.36	16.67

Protein Annotations

EMBL:ACUP02007734	EnsemblPlants:KRH26667	EnsemblPlantsGene:GLYMA_12G187200	PANTHER:PTHR33177	PANTHER:PTHR33177:SF11	ProteinID:KRH26667
ProteinID:KRH26667.1	SEG:seg	UniParc:UPI000233D752	UniProt:I1LTY4	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr12:-:34824285..34825948

Molecular Weight (calculated)

12438.7 Da

IEP (calculated)

5.282

GRAVY (calculated)

-0.766

Length

112 amino acids

Sequence
(BLAST)

001: MCKRKCPGRE LKLPSRPTSA ELSSSTSSGE WPELSSSSSA SSVSCTSKMP KESEEENEQR ENSTPETKAM DLVGCPRCFM YVMLSEVDPK CPKCKTTVFL
101: ELFKDENLKT NS

Best Arabidopsis Sequence Match ( AT5G06270.1 )
(BLAST)

001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.