Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26665 | Soybean | plastid | 65.42 | 67.96 |
| KRH25293 | Soybean | plastid | 54.21 | 53.21 |
| GSMUA_Achr8P07800_001 | Banana | cytosol, extracellular | 24.3 | 52.0 |
| KRH30377 | Soybean | plastid | 50.47 | 49.09 |
| KRH67976 | Soybean | nucleus, plastid | 49.53 | 48.62 |
| KRG96232 | Soybean | nucleus, plastid | 49.53 | 48.62 |
| TraesCS7D01G324300.1 | Wheat | cytosol | 27.1 | 44.62 |
| GSMUA_Achr11P... | Banana | nucleus | 43.93 | 43.93 |
| Zm00001d001776_P001 | Maize | cytosol, plastid | 31.78 | 42.5 |
| Os08t0102250-00 | Rice | cytosol | 26.17 | 41.18 |
| GSMUA_Achr8P16130_001 | Banana | cytosol | 38.32 | 39.81 |
| Os04t0684600-01 | Rice | cytosol | 29.91 | 39.51 |
| EES11682 | Sorghum | cytosol, plastid | 34.58 | 39.36 |
| TraesCS2D01G379500.1 | Wheat | cytosol | 29.91 | 39.02 |
| TraesCS2A01G383200.1 | Wheat | cytosol | 29.91 | 39.02 |
| KRH22649 | Soybean | cytosol | 24.3 | 38.81 |
| Zm00001d025361_P001 | Maize | nucleus | 40.19 | 38.74 |
| HORVU2Hr1G089140.1 | Barley | cytosol | 29.91 | 38.55 |
| TraesCS2B01G400400.1 | Wheat | cytosol | 29.91 | 38.55 |
| GSMUA_Achr6P19430_001 | Banana | nucleus | 41.12 | 37.93 |
| EES10769 | Sorghum | mitochondrion | 40.19 | 37.39 |
| GSMUA_Achr10P... | Banana | cytosol | 41.12 | 37.29 |
| TraesCS2B01G312800.1 | Wheat | cytosol | 39.25 | 36.52 |
| TraesCS2D01G294500.1 | Wheat | cytosol | 39.25 | 36.52 |
| TraesCS2A01G296600.1 | Wheat | cytosol | 39.25 | 36.52 |
| TraesCS4B01G346800.1 | Wheat | plastid | 39.25 | 36.52 |
| KRH26667 | Soybean | nucleus, plastid | 37.38 | 35.71 |
| TraesCS1D01G275300.1 | Wheat | nucleus | 42.99 | 34.59 |
| Zm00001d003763_P001 | Maize | cytosol | 42.06 | 34.35 |
| TraesCS1A01G275700.1 | Wheat | plastid | 42.99 | 34.33 |
| TraesCS2D01G597400.1 | Wheat | cytosol, plastid | 27.1 | 34.12 |
| Os04t0415000-01 | Rice | cytosol | 36.45 | 33.62 |
| Zm00001d038287_P001 | Maize | mitochondrion | 40.19 | 32.82 |
| Os05t0442000-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 40.19 | 32.58 |
| KRH22648 | Soybean | nucleus, plastid | 36.45 | 32.23 |
| GSMUA_Achr6P07030_001 | Banana | cytosol, plastid | 37.38 | 32.0 |
| GSMUA_Achr9P02640_001 | Banana | cytosol | 34.58 | 31.36 |
| HORVU2Hr1G073380.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 41.12 | 31.21 |
| KRH26666 | Soybean | cytosol | 32.71 | 30.97 |
| EES05192 | Sorghum | nucleus, plastid | 41.12 | 30.56 |
| Os01t0863500-01 | Rice | plastid | 36.45 | 30.23 |
| TraesCS3D01G368200.1 | Wheat | plastid | 35.51 | 30.16 |
| HORVU3Hr1G083720.1 | Barley | plastid | 35.51 | 30.16 |
| Os02t0536500-01 | Rice | mitochondrion | 34.58 | 30.08 |
| Zm00001d042754_P001 | Maize | mitochondrion, plastid | 34.58 | 30.08 |
| TraesCS3A01G375700.1 | Wheat | plastid | 35.51 | 29.92 |
| TraesCS3B01G407900.1 | Wheat | plastid | 35.51 | 29.92 |
| Zm00001d016743_P001 | Maize | nucleus | 40.19 | 28.67 |
| HORVU1Hr1G074000.6 | Barley | mitochondrion | 42.06 | 27.78 |
| OQU87905 | Sorghum | mitochondrion, plastid | 28.97 | 26.27 |
| TraesCS1B01G284900.1 | Wheat | extracellular, plastid, vacuole | 42.99 | 25.14 |
| EES19598 | Sorghum | cytosol, plastid | 40.19 | 23.5 |
| GSMUA_Achr6P12990_001 | Banana | nucleus | 28.04 | 14.71 |
Protein Annotations
| EMBL:ACUP02008425 | EnsemblPlants:KRH22650 | EnsemblPlantsGene:GLYMA_13G314400 | PANTHER:PTHR33177 | PANTHER:PTHR33177:SF11 | ProteinID:KRH22650 |
| ProteinID:KRH22650.1 | SEG:seg | UniParc:UPI00023CF9F4 | UniProt:I1M4A5 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr13:-:40977943..40978908
Molecular Weight (calculated)
11965.1 Da
IEP (calculated)
4.829
GRAVY (calculated)
-0.589
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNERARSPR LEFDLMLSPP RTANSSELST SESSLCLYSS SDPDSCVSSE TNDEEIRSMV LVGCLRCLMY VLFSKDDPNP KCPKCKSTVL LDFLNDNKQK
101: NTNKTTT
101: NTNKTTT
001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN
101: TTATAANTRR KKKTWWN
Arabidopsis Description
E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.