Factsheet for GSMUA_Achr10P04680_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	28.81	68.0
GSMUA_Achr6P19430_001	Banana	nucleus	57.63	58.62
KRG96232	Soybean	nucleus, plastid	50.85	55.05
KRH67976	Soybean	nucleus, plastid	50.85	55.05
Os08t0102250-00	Rice	cytosol	30.51	52.94
TraesCS7D01G324300.1	Wheat	cytosol	28.81	52.31
Bra009178.1-P	Field mustard	plastid	51.69	49.59
CDY64732	Canola	plastid	51.69	49.59
GSMUA_Achr11P...	Banana	nucleus	44.92	49.53
AT5G06270.1	Thale cress	mitochondrion, plastid	50.85	49.18
CDX80998	Canola	plastid	50.0	48.76
Solyc10g083140.1.1	Tomato	plastid	27.97	48.53
Os04t0684600-01	Rice	cytosol	33.05	48.15
CDY47258	Canola	plastid	49.15	47.93
Bra028737.1-P	Field mustard	plastid	49.15	47.93
KRH22649	Soybean	cytosol	27.12	47.76
Zm00001d001776_P001	Maize	cytosol, plastid	32.2	47.5
Bra005888.1-P	Field mustard	plastid	48.31	47.11
KRH25293	Soybean	plastid	43.22	46.79
GSMUA_Achr8P16130_001	Banana	cytosol	40.68	46.6
Bra038666.1-P	Field mustard	plastid	44.92	45.69
TraesCS2A01G383200.1	Wheat	cytosol	31.36	45.12
TraesCS2D01G379500.1	Wheat	cytosol	31.36	45.12
TraesCS2B01G400400.1	Wheat	cytosol	31.36	44.58
HORVU2Hr1G089140.1	Barley	cytosol	31.36	44.58
AT3G11600.1	Thale cress	plastid	44.07	44.44
CDY14087	Canola	plastid	50.85	44.44
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	46.61	44.0
KRH30377	Soybean	plastid	40.68	43.64
Bra034826.1-P	Field mustard	plastid	43.22	43.22
Solyc06g073990.1.1	Tomato	nucleus, plastid	43.22	42.86
EES11682	Sorghum	cytosol, plastid	33.9	42.55
CDY08510	Canola	nucleus, plastid	42.37	42.37
TraesCS2D01G597400.1	Wheat	cytosol, plastid	30.51	42.35
CDY04984	Canola	plastid	48.31	42.22
Bra001413.1-P	Field mustard	plastid	42.37	42.02
CDX73863	Canola	plastid	42.37	42.02
CDY01039	Canola	mitochondrion, nucleus	41.53	41.53
Zm00001d042754_P001	Maize	mitochondrion, plastid	43.22	41.46
PGSC0003DMT400015190	Potato	nucleus, plastid	43.22	41.46
KRH22650	Soybean	cytosol, plastid	37.29	41.12
PGSC0003DMT400072576	Potato	plastid	36.44	40.57
TraesCS3D01G368200.1	Wheat	plastid	43.22	40.48
HORVU3Hr1G083720.1	Barley	plastid	43.22	40.48
Os01t0863500-01	Rice	plastid	44.07	40.31
TraesCS3B01G407900.1	Wheat	plastid	43.22	40.16
TraesCS3A01G375700.1	Wheat	plastid	42.37	39.37
PGSC0003DMT400050486	Potato	cytosol, plastid	38.98	38.98
Solyc01g007870.2.1	Tomato	nucleus	41.53	38.89
PGSC0003DMT400042213	Potato	cytosol	43.22	38.64
TraesCS1D01G275300.1	Wheat	nucleus	43.22	38.35
GSMUA_Achr9P02640_001	Banana	cytosol	38.14	38.14
TraesCS1A01G275700.1	Wheat	plastid	43.22	38.06
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	42.37	37.88
OQU87905	Sorghum	mitochondrion, plastid	37.29	37.29
Zm00001d038287_P001	Maize	mitochondrion	40.68	36.64
KRH26665	Soybean	plastid	31.36	35.92
KRH26666	Soybean	cytosol	32.2	33.63
KRH22648	Soybean	nucleus, plastid	33.9	33.06
KRH26667	Soybean	nucleus, plastid	31.36	33.04
HORVU1Hr1G074000.6	Barley	mitochondrion	40.68	29.63
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	43.22	27.87
EES19598	Sorghum	cytosol, plastid	41.53	26.78
VIT_08s0007g02600.t01	Wine grape	plastid	47.46	25.69
GSMUA_Achr6P12990_001	Banana	nucleus	38.14	22.06

Protein Annotations

EnsemblPlants:GSMUA_Achr10P04680_001	EnsemblPlants:GSMUA_Achr10T04680_001	EnsemblPlantsGene:GSMUA_Achr10G04680_001	PANTHER:PTHR33177	PANTHER:PTHR33177:SF8	SEG:seg
UniParc:UPI000296EDEB	UniProt:M0RFE5	MapMan:35.2	:	:	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G04680_001]

Coordinates

chr10:-:14326484..14326840

Molecular Weight (calculated)

12758.0 Da

IEP (calculated)

9.092

GRAVY (calculated)

-0.760

Length

118 amino acids

Sequence
(BLAST)

001: MSRNHGKNPK VDLKLNLSAK QVRARGGPST RAVVVSEDED DSSSSPSVSP PSSCVSSEEE QKQADSPEAT SSMVLAGCPR CLMYVMLSEK DPKCPKCKST
101: VLVDFHRGST SSRRSRRS

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.