Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- plastid 5
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400072576 | Potato | plastid | 82.35 | 52.83 |
| GSMUA_Achr8P07800_001 | Banana | cytosol, extracellular | 33.82 | 46.0 |
| Zm00001d001776_P001 | Maize | cytosol, plastid | 44.12 | 37.5 |
| TraesCS7D01G324300.1 | Wheat | cytosol | 35.29 | 36.92 |
| TraesCS2A01G383200.1 | Wheat | cytosol | 42.65 | 35.37 |
| TraesCS2D01G379500.1 | Wheat | cytosol | 42.65 | 35.37 |
| Os08t0102250-00 | Rice | cytosol | 35.29 | 35.29 |
| TraesCS2B01G400400.1 | Wheat | cytosol | 42.65 | 34.94 |
| HORVU2Hr1G089140.1 | Barley | cytosol | 42.65 | 34.94 |
| Os04t0684600-01 | Rice | cytosol | 41.18 | 34.57 |
| TraesCS2D01G597400.1 | Wheat | cytosol, plastid | 39.71 | 31.76 |
| Solyc01g007870.2.1 | Tomato | nucleus | 55.88 | 30.16 |
| EES11682 | Sorghum | cytosol, plastid | 41.18 | 29.79 |
| GSMUA_Achr6P19430_001 | Banana | nucleus | 48.53 | 28.45 |
| GSMUA_Achr8P16130_001 | Banana | cytosol | 42.65 | 28.16 |
| GSMUA_Achr11P... | Banana | nucleus | 44.12 | 28.04 |
| GSMUA_Achr10P... | Banana | cytosol | 48.53 | 27.97 |
| TraesCS2D01G294500.1 | Wheat | cytosol | 45.59 | 26.96 |
| TraesCS4B01G346800.1 | Wheat | plastid | 45.59 | 26.96 |
| TraesCS2B01G312800.1 | Wheat | cytosol | 45.59 | 26.96 |
| TraesCS2A01G296600.1 | Wheat | cytosol | 45.59 | 26.96 |
| Zm00001d025361_P001 | Maize | nucleus | 42.65 | 26.13 |
| EES10769 | Sorghum | mitochondrion | 44.12 | 26.09 |
| Os04t0415000-01 | Rice | cytosol | 44.12 | 25.86 |
| GSMUA_Achr6P07030_001 | Banana | cytosol, plastid | 47.06 | 25.6 |
| Zm00001d038287_P001 | Maize | mitochondrion | 48.53 | 25.19 |
| GSMUA_Achr9P02640_001 | Banana | cytosol | 42.65 | 24.58 |
| Solyc06g073990.1.1 | Tomato | nucleus, plastid | 42.65 | 24.37 |
| Os05t0442000-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 47.06 | 24.24 |
| TraesCS1D01G275300.1 | Wheat | nucleus | 45.59 | 23.31 |
| TraesCS1A01G275700.1 | Wheat | plastid | 45.59 | 23.13 |
| Zm00001d003763_P001 | Maize | cytosol | 44.12 | 22.9 |
| Os02t0536500-01 | Rice | mitochondrion | 41.18 | 22.76 |
| Os01t0863500-01 | Rice | plastid | 42.65 | 22.48 |
| HORVU3Hr1G083720.1 | Barley | plastid | 41.18 | 22.22 |
| EES05192 | Sorghum | nucleus, plastid | 47.06 | 22.22 |
| TraesCS3D01G368200.1 | Wheat | plastid | 41.18 | 22.22 |
| TraesCS3B01G407900.1 | Wheat | plastid | 41.18 | 22.05 |
| TraesCS3A01G375700.1 | Wheat | plastid | 41.18 | 22.05 |
| Zm00001d042754_P001 | Maize | mitochondrion, plastid | 39.71 | 21.95 |
| HORVU2Hr1G073380.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 44.12 | 21.28 |
| OQU87905 | Sorghum | mitochondrion, plastid | 36.76 | 21.19 |
| Zm00001d016743_P001 | Maize | nucleus | 45.59 | 20.67 |
| HORVU1Hr1G074000.6 | Barley | mitochondrion | 44.12 | 18.52 |
| TraesCS1B01G284900.1 | Wheat | extracellular, plastid, vacuole | 45.59 | 16.94 |
| EES19598 | Sorghum | cytosol, plastid | 45.59 | 16.94 |
| GSMUA_Achr6P12990_001 | Banana | nucleus | 33.82 | 11.27 |
Protein Annotations
| EnsemblPlants:Solyc10g083140.1.1 | EnsemblPlantsGene:Solyc10g083140.1 | PANTHER:PTHR33177 | PANTHER:PTHR33177:SF8 | UniParc:UPI0002769C1D | UniProt:K4D3A1 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:62995573..62995779
Molecular Weight (calculated)
7347.9 Da
IEP (calculated)
7.730
GRAVY (calculated)
-0.249
Length
68 amino acids
Sequence
(BLAST)
(BLAST)
1: MSPTNSCVSS DNSSGGQRGS NSPEAVTSML LVGCQRCLMY VMVSEVNDPP RCPKCKSTCL LEVIYEKK
001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN
101: ENATNANANA AAASSGRKTR RN
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [plastid,mitochondrion]
SUBAcon: [plastid,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.