CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016743_P001	Maize	nucleus	63.89	61.33
EES10769	Sorghum	mitochondrion	47.22	59.13
Os02t0536500-01	Rice	mitochondrion	48.61	56.91
KRH67976	Soybean	nucleus, plastid	40.97	54.13
KRG96232	Soybean	nucleus, plastid	40.97	54.13
GSMUA_Achr8P16130_001	Banana	cytosol	38.19	53.4
GSMUA_Achr11P...	Banana	nucleus	38.89	52.34
Solyc10g083140.1.1	Tomato	plastid	22.22	47.06
AT5G06270.1	Thale cress	mitochondrion, plastid	38.19	45.08
Bra009178.1-P	Field mustard	plastid	38.19	44.72
CDY64732	Canola	plastid	38.19	44.72
Bra028737.1-P	Field mustard	plastid	37.5	44.63
EES11682	Sorghum	cytosol, plastid	28.47	43.62
KRH25293	Soybean	plastid	32.64	43.12
KRH30377	Soybean	plastid	32.64	42.73
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	36.81	42.4
CDY47258	Canola	plastid	35.42	42.15
PGSC0003DMT400072576	Potato	plastid	30.56	41.51
Bra038666.1-P	Field mustard	plastid	33.33	41.38
Bra005888.1-P	Field mustard	plastid	34.72	41.32
KRH22650	Soybean	cytosol, plastid	30.56	41.12
AT3G11600.1	Thale cress	plastid	33.33	41.03
CDX80998	Canola	plastid	34.03	40.5
Solyc01g007870.2.1	Tomato	nucleus	35.42	40.48
CDY14087	Canola	plastid	37.5	40.0
PGSC0003DMT400015190	Potato	nucleus, plastid	34.03	39.84
Solyc06g073990.1.1	Tomato	nucleus, plastid	32.64	39.5
PGSC0003DMT400042213	Potato	cytosol	36.11	39.39
KRH26665	Soybean	plastid	27.78	38.84
CDX73863	Canola	plastid	31.94	38.66
Bra001413.1-P	Field mustard	plastid	31.94	38.66
CDY04984	Canola	plastid	36.11	38.52
Bra034826.1-P	Field mustard	plastid	31.25	38.14
PGSC0003DMT400050486	Potato	cytosol, plastid	31.25	38.14
CDY08510	Canola	nucleus, plastid	31.25	38.14
GSMUA_Achr9P02640_001	Banana	cytosol	31.25	38.14
KRH26667	Soybean	nucleus, plastid	29.17	37.5
KRH22649	Soybean	cytosol	17.36	37.31
CDY01039	Canola	mitochondrion, nucleus	30.56	37.29
OQU87905	Sorghum	mitochondrion, plastid	29.86	36.44
KRH22648	Soybean	nucleus, plastid	27.08	32.23
KRH26666	Soybean	cytosol	25.0	31.86
EES19598	Sorghum	cytosol, plastid	36.11	28.42
GSMUA_Achr6P12990_001	Banana	nucleus	36.11	25.49
VIT_08s0007g02600.t01	Wine grape	plastid	38.19	25.23

Protein Annotations

EnsemblPlants:EES05192	EnsemblPlantsGene:SORBI_3004G167500	EntrezGene:8059217	PANTHER:PTHR33177	PANTHER:PTHR33177:SF8	ProteinID:EES05192
ProteinID:EES05192.1	RefSeq:XP_002452216.1	SEG:seg	UniParc:UPI0001A856FD	UniProt:C5XU03	MapMan:35.2

Description

hypothetical protein

Coordinates

chr4:+:51771733..51773046

Molecular Weight (calculated)

15308.7 Da

IEP (calculated)

7.471

GRAVY (calculated)

-0.770

Length

144 amino acids

Sequence
(BLAST)

001: MSRGSKGGRG AGGLDLKLHL SPPAPPARGT EGAAAPSLSS DEEWSSSSSP PSSCLSSEGE REPHQRSQSH GLQWSDSPEA TSMVLAACPR CLMYVMLSEA
101: DPRCPRCRSP VLLDFLHHAA RNSNVSREDD GDHSRGCGGR NRRA

Best Arabidopsis Sequence Match ( AT5G06270.2 )
(BLAST)

001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.