CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47258	Canola	plastid	89.26	89.26
Bra005888.1-P	Field mustard	plastid	87.6	87.6
AT5G06270.1	Thale cress	mitochondrion, plastid	84.3	83.61
CDY64732	Canola	plastid	83.47	82.11
CDY04984	Canola	plastid	83.47	74.81
CDY14087	Canola	plastid	81.82	73.33
KRH67976	Soybean	nucleus, plastid	61.16	67.89
KRG96232	Soybean	nucleus, plastid	61.16	67.89
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	26.45	64.0
CDX73863	Canola	plastid	57.02	57.98
CDY08510	Canola	nucleus, plastid	55.37	56.78
CDY01039	Canola	mitochondrion, nucleus	54.55	55.93
GSMUA_Achr8P16130_001	Banana	cytosol	42.98	50.49
GSMUA_Achr11P...	Banana	nucleus	44.63	50.47
GSMUA_Achr10P...	Banana	cytosol	48.76	50.0
TraesCS7D01G324300.1	Wheat	cytosol	26.45	49.23
Os04t0415000-01	Rice	cytosol	47.11	49.14
TraesCS2D01G597400.1	Wheat	cytosol, plastid	33.88	48.24
TraesCS2B01G400400.1	Wheat	cytosol	33.06	48.19
Solyc06g073990.1.1	Tomato	nucleus, plastid	47.11	47.9
TraesCS2B01G312800.1	Wheat	cytosol	45.45	47.83
TraesCS2D01G294500.1	Wheat	cytosol	45.45	47.83
TraesCS4B01G346800.1	Wheat	plastid	45.45	47.83
TraesCS2A01G296600.1	Wheat	cytosol	45.45	47.83
Zm00001d025361_P001	Maize	nucleus	43.8	47.75
TraesCS2D01G379500.1	Wheat	cytosol	32.23	47.56
TraesCS2A01G383200.1	Wheat	cytosol	32.23	47.56
Zm00001d001776_P001	Maize	cytosol, plastid	30.58	46.25
EES10769	Sorghum	mitochondrion	43.8	46.09
GSMUA_Achr6P19430_001	Banana	nucleus	43.8	45.69
Os04t0684600-01	Rice	cytosol	30.58	45.68
PGSC0003DMT400015190	Potato	nucleus, plastid	46.28	45.53
HORVU2Hr1G089140.1	Barley	cytosol	30.58	44.58
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	45.45	44.0
PGSC0003DMT400050486	Potato	cytosol, plastid	42.15	43.22
EES11682	Sorghum	cytosol, plastid	32.23	41.49
Os02t0536500-01	Rice	mitochondrion	42.15	41.46
TraesCS3D01G368200.1	Wheat	plastid	42.98	41.27
HORVU3Hr1G083720.1	Barley	plastid	42.98	41.27
Zm00001d038287_P001	Maize	mitochondrion	44.63	41.22
Os08t0102250-00	Rice	cytosol	23.14	41.18
Os01t0863500-01	Rice	plastid	42.98	40.31
TraesCS3B01G407900.1	Wheat	plastid	42.15	40.16
TraesCS3A01G375700.1	Wheat	plastid	42.15	40.16
Zm00001d042754_P001	Maize	mitochondrion, plastid	40.5	39.84
Zm00001d003763_P001	Maize	cytosol	42.98	39.69
TraesCS1D01G275300.1	Wheat	nucleus	42.98	39.1
GSMUA_Achr9P02640_001	Banana	cytosol	38.02	38.98
TraesCS1A01G275700.1	Wheat	plastid	42.98	38.81
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	42.15	38.64
OQU87905	Sorghum	mitochondrion, plastid	35.54	36.44
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	42.15	36.17
VIT_08s0007g02600.t01	Wine grape	plastid	63.64	35.32
EES05192	Sorghum	nucleus, plastid	40.5	34.03
Zm00001d016743_P001	Maize	nucleus	39.67	32.0
HORVU1Hr1G074000.6	Barley	mitochondrion	41.32	30.86
EES19598	Sorghum	cytosol, plastid	43.8	28.96
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	42.98	28.42
GSMUA_Achr6P12990_001	Banana	nucleus	34.71	20.59

Protein Annotations

EnsemblPlants:CDX80998	EnsemblPlantsGene:GSBRNA2T00134429001	PANTHER:PTHR33177	PANTHER:PTHR33177:SF8	ProteinID:CDX80998	ProteinID:CDX80998.1
SEG:seg	UniParc:UPI0004EAED29	MapMan:35.2	:	:	:

Description

BnaC03g02520D

Coordinates

chrLK031823:+:1211525..1212344

Molecular Weight (calculated)

13213.6 Da

IEP (calculated)

10.613

GRAVY (calculated)

-0.807

Length

121 amino acids

Sequence
(BLAST)

001: MSRRSPKPEL KLNLSTPTSS RRRVVRSPSR SATTSPTSPQ SSCVSSEMNQ DGQSVRYSTS PETSSMVLVG CPRCLMYVML SQDDPKCPKC KSTVLLDFNH
101: ENTSNANAPA ASSSGRKTRR N

Best Arabidopsis Sequence Match ( AT5G06270.2 )
(BLAST)

001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.