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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 4
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47258 Canola plastid 91.74 91.74
CDX80998 Canola plastid 87.6 87.6
AT5G06270.1 Thale cress mitochondrion, plastid 85.12 84.43
Bra028737.1-P Field mustard plastid 84.3 84.3
Bra009178.1-P Field mustard plastid 85.12 83.74
KRH67976 Soybean nucleus, plastid 59.5 66.06
KRG96232 Soybean nucleus, plastid 59.5 66.06
GSMUA_Achr8P07800_001 Banana cytosol, extracellular 25.62 62.0
Bra038666.1-P Field mustard plastid 58.68 61.21
Bra001413.1-P Field mustard plastid 58.68 59.66
Bra034826.1-P Field mustard plastid 57.02 58.47
GSMUA_Achr11P... Banana nucleus 45.45 51.4
TraesCS2B01G400400.1 Wheat cytosol 33.88 49.4
TraesCS7D01G324300.1 Wheat cytosol 26.45 49.23
Os04t0415000-01 Rice cytosol 47.11 49.14
TraesCS2D01G379500.1 Wheat cytosol 33.06 48.78
GSMUA_Achr8P16130_001 Banana cytosol 41.32 48.54
GSMUA_Achr10P... Banana cytosol 47.11 48.31
Solyc06g073990.1.1 Tomato nucleus, plastid 47.11 47.9
TraesCS2A01G383200.1 Wheat cytosol 32.23 47.56
TraesCS2D01G294500.1 Wheat cytosol 44.63 46.96
TraesCS2B01G312800.1 Wheat cytosol 44.63 46.96
TraesCS4B01G346800.1 Wheat plastid 44.63 46.96
TraesCS2A01G296600.1 Wheat cytosol 44.63 46.96
Zm00001d025361_P001 Maize nucleus 42.98 46.85
PGSC0003DMT400015190 Potato nucleus, plastid 47.11 46.34
Zm00001d001776_P001 Maize cytosol, plastid 30.58 46.25
TraesCS2D01G597400.1 Wheat cytosol, plastid 32.23 45.88
HORVU2Hr1G089140.1 Barley cytosol 31.41 45.78
Os04t0684600-01 Rice cytosol 30.58 45.68
GSMUA_Achr6P07030_001 Banana cytosol, plastid 47.11 45.6
EES10769 Sorghum mitochondrion 42.98 45.22
PGSC0003DMT400050486 Potato cytosol, plastid 43.8 44.92
GSMUA_Achr6P19430_001 Banana nucleus 42.98 44.83
Os08t0102250-00 Rice cytosol 23.97 42.65
EES11682 Sorghum cytosol, plastid 32.23 41.49
TraesCS3D01G368200.1 Wheat plastid 42.15 40.48
Zm00001d038287_P001 Maize mitochondrion 42.98 39.69
TraesCS3B01G407900.1 Wheat plastid 41.32 39.37
TraesCS3A01G375700.1 Wheat plastid 41.32 39.37
Os02t0536500-01 Rice mitochondrion 39.67 39.02
Zm00001d003763_P001 Maize cytosol 42.15 38.93
HORVU3Hr1G083720.1 Barley plastid 40.5 38.89
Os01t0863500-01 Rice plastid 41.32 38.76
TraesCS1D01G275300.1 Wheat nucleus 42.15 38.35
Zm00001d042754_P001 Maize mitochondrion, plastid 38.84 38.21
TraesCS1A01G275700.1 Wheat plastid 42.15 38.06
GSMUA_Achr9P02640_001 Banana cytosol 36.36 37.29
Os05t0442000-00 Rice cytosol, mitochondrion, nucleus, plastid 40.5 37.12
OQU87905 Sorghum mitochondrion, plastid 34.71 35.59
HORVU2Hr1G073380.7 Barley cytosol, mitochondrion, nucleus, plastid 41.32 35.46
EES05192 Sorghum nucleus, plastid 41.32 34.72
VIT_08s0007g02600.t01 Wine grape plastid 61.16 33.95
Zm00001d016743_P001 Maize nucleus 41.32 33.33
HORVU1Hr1G074000.6 Barley mitochondrion 40.5 30.25
TraesCS1B01G284900.1 Wheat extracellular, plastid, vacuole 42.15 27.87
EES19598 Sorghum cytosol, plastid 42.15 27.87
GSMUA_Achr6P12990_001 Banana nucleus 35.54 21.08
Protein Annotations
EnsemblPlants:Bra005888.1EnsemblPlants:Bra005888.1-PEnsemblPlantsGene:Bra005888PANTHER:PTHR33177PANTHER:PTHR33177:SF8SEG:seg
UniParc:UPI000253F5E6UniProt:M4CNV0MapMan:35.2:::
Description
AT5G06270 (E=4e-032) | unknown protein
Coordinates
chrA03:+:1072727..1073092
Molecular Weight (calculated)
13255.6 Da
IEP (calculated)
10.386
GRAVY (calculated)
-0.836
Length
121 amino acids
Sequence
(BLAST)
001: MSRRSPKPEM KLNLSPPTSS RRRVVRSPSR SATTSPTSPQ SSCVSSEMNQ DDQSVRYSTS PETSSMVLVG CPRCLMYVML SQDDPKCPKC KSTVLLDFNH
101: ENASNANAPA ASSSGRKTRR N
Best Arabidopsis Sequence Match ( AT5G06270.2 )
(BLAST)
001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.