Factsheet for Bra038666.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G11600.1	Thale cress	plastid	85.34	84.62
Bra001413.1-P	Field mustard	plastid	85.34	83.19
Bra034826.1-P	Field mustard	plastid	80.17	78.81
KRH67976	Soybean	nucleus, plastid	59.48	63.3
KRG96232	Soybean	nucleus, plastid	59.48	63.3
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	26.72	62.0
Bra028737.1-P	Field mustard	plastid	62.93	60.33
Bra009178.1-P	Field mustard	plastid	62.93	59.35
Bra005888.1-P	Field mustard	plastid	61.21	58.68
GSMUA_Achr8P16130_001	Banana	cytosol	43.1	48.54
Solyc06g073990.1.1	Tomato	nucleus, plastid	49.14	47.9
TraesCS7D01G324300.1	Wheat	cytosol	26.72	47.69
GSMUA_Achr11P...	Banana	nucleus	42.24	45.79
Os08t0102250-00	Rice	cytosol	26.72	45.59
TraesCS4B01G346800.1	Wheat	plastid	44.83	45.22
TraesCS2D01G294500.1	Wheat	cytosol	44.83	45.22
TraesCS2B01G312800.1	Wheat	cytosol	44.83	45.22
TraesCS2A01G296600.1	Wheat	cytosol	44.83	45.22
TraesCS2D01G379500.1	Wheat	cytosol	31.9	45.12
Zm00001d025361_P001	Maize	nucleus	43.1	45.05
Zm00001d001776_P001	Maize	cytosol, plastid	31.03	45.0
GSMUA_Achr10P...	Banana	cytosol	45.69	44.92
TraesCS2B01G400400.1	Wheat	cytosol	31.9	44.58
TraesCS2A01G383200.1	Wheat	cytosol	31.03	43.9
PGSC0003DMT400015190	Potato	nucleus, plastid	46.55	43.9
EES10769	Sorghum	mitochondrion	43.1	43.48
HORVU2Hr1G089140.1	Barley	cytosol	31.03	43.37
Os04t0415000-01	Rice	cytosol	43.1	43.1
GSMUA_Achr6P19430_001	Banana	nucleus	42.24	42.24
Os04t0684600-01	Rice	cytosol	29.31	41.98
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	44.83	41.6
EES11682	Sorghum	cytosol, plastid	33.62	41.49
Zm00001d038287_P001	Maize	mitochondrion	46.55	41.22
PGSC0003DMT400050486	Potato	cytosol, plastid	41.38	40.68
TraesCS2D01G597400.1	Wheat	cytosol, plastid	29.31	40.0
TraesCS1D01G275300.1	Wheat	nucleus	45.69	39.85
TraesCS1A01G275700.1	Wheat	plastid	45.69	39.55
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	44.83	39.39
Zm00001d003763_P001	Maize	cytosol	43.1	38.17
HORVU3Hr1G083720.1	Barley	plastid	41.38	38.1
TraesCS3D01G368200.1	Wheat	plastid	40.52	37.3
GSMUA_Achr9P02640_001	Banana	cytosol	37.93	37.29
TraesCS3B01G407900.1	Wheat	plastid	40.52	37.01
TraesCS3A01G375700.1	Wheat	plastid	39.66	36.22
Zm00001d042754_P001	Maize	mitochondrion, plastid	37.93	35.77
Os02t0536500-01	Rice	mitochondrion	37.93	35.77
Os01t0863500-01	Rice	plastid	39.66	35.66
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	43.1	35.46
VIT_08s0007g02600.t01	Wine grape	plastid	62.93	33.49
EES05192	Sorghum	nucleus, plastid	41.38	33.33
Zm00001d016743_P001	Maize	nucleus	42.24	32.67
OQU87905	Sorghum	mitochondrion, plastid	32.76	32.2
HORVU1Hr1G074000.6	Barley	mitochondrion	43.97	31.48
EES19598	Sorghum	cytosol, plastid	47.41	30.05
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	45.69	28.96
GSMUA_Achr6P12990_001	Banana	nucleus	34.48	19.61

Protein Annotations

EnsemblPlants:Bra038666.1	EnsemblPlants:Bra038666.1-P	EnsemblPlantsGene:Bra038666	PANTHER:PTHR33177	PANTHER:PTHR33177:SF8	SEG:seg
UniParc:UPI0002543813	UniProt:M4FC50	MapMan:35.2	:	:	:

Description

AT3G11600 (E=1e-038) | unknown protein

Coordinates

chrA01:-:26706458..26706808

Molecular Weight (calculated)

12841.4 Da

IEP (calculated)

9.880

GRAVY (calculated)

-0.633

Length

116 amino acids

Sequence
(BLAST)

001: MSRRNRNGPK LELKLNLSPP SSQGNQMNLV RSPSRSNTTS PNSCVSSETM QEEMETATSM VLVGCPRCLM YVMLSQDDPK CPKCKSTVLL DFLQQNASAA
101: TTAPAATTKR KKTWWN

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.