Factsheet for TraesCS7D01G324300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001776_P001	Maize	cytosol, plastid	69.23	56.25
TraesCS2D01G379500.1	Wheat	cytosol	67.69	53.66
Os08t0102250-00	Rice	cytosol	55.38	52.94
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	40.0	52.0
EES11682	Sorghum	cytosol, plastid	69.23	47.87
TraesCS2D01G597400.1	Wheat	cytosol, plastid	58.46	44.71
Solyc10g083140.1.1	Tomato	plastid	36.92	35.29
KRG96232	Soybean	nucleus, plastid	52.31	31.19
KRH67976	Soybean	nucleus, plastid	50.77	30.28
KRH22649	Soybean	cytosol	30.77	29.85
GSMUA_Achr6P19430_001	Banana	nucleus	52.31	29.31
KRH30377	Soybean	plastid	49.23	29.09
GSMUA_Achr10P...	Banana	cytosol	52.31	28.81
AT3G11600.1	Thale cress	plastid	49.23	27.35
KRH22650	Soybean	cytosol, plastid	44.62	27.1
Solyc06g073990.1.1	Tomato	nucleus, plastid	49.23	26.89
Bra038666.1-P	Field mustard	plastid	47.69	26.72
KRH25293	Soybean	plastid	44.62	26.61
CDX80998	Canola	plastid	49.23	26.45
CDY47258	Canola	plastid	49.23	26.45
Bra005888.1-P	Field mustard	plastid	49.23	26.45
PGSC0003DMT400072576	Potato	plastid	43.08	26.42
CDY08510	Canola	nucleus, plastid	47.69	26.27
CDY01039	Canola	mitochondrion, nucleus	47.69	26.27
Bra034826.1-P	Field mustard	plastid	47.69	26.27
AT5G06270.1	Thale cress	mitochondrion, plastid	49.23	26.23
CDX73863	Canola	plastid	47.69	26.05
Bra001413.1-P	Field mustard	plastid	47.69	26.05
TraesCS3D01G368200.1	Wheat	plastid	49.23	25.4
KRH26665	Soybean	plastid	40.0	25.24
CDY64732	Canola	plastid	47.69	25.2
Bra009178.1-P	Field mustard	plastid	47.69	25.2
Bra028737.1-P	Field mustard	plastid	46.15	24.79
PGSC0003DMT400015190	Potato	nucleus, plastid	46.15	24.39
TraesCS2D01G294500.1	Wheat	cytosol	43.08	24.35
KRH26667	Soybean	nucleus, plastid	41.54	24.11
KRH26666	Soybean	cytosol	41.54	23.89
CDY14087	Canola	plastid	49.23	23.7
TraesCS1D01G275300.1	Wheat	nucleus	47.69	23.31
KRH22648	Soybean	nucleus, plastid	43.08	23.14
CDY04984	Canola	plastid	47.69	22.96
PGSC0003DMT400050486	Potato	cytosol, plastid	41.54	22.88
Solyc01g007870.2.1	Tomato	nucleus	43.08	22.22
PGSC0003DMT400042213	Potato	cytosol	44.62	21.97
VIT_08s0007g02600.t01	Wine grape	plastid	52.31	15.6

Protein Annotations

EnsemblPlants:TraesCS7D01G324300.1

EnsemblPlantsGene:TraesCS7D01G324300

PANTHER:PTHR33177

PANTHER:PTHR33177:SF20

MapMan:35.2

Description

No Description!

Coordinates

chr7D:-:414103102..414103299

Molecular Weight (calculated)

7370.9 Da

IEP (calculated)

5.621

GRAVY (calculated)

-0.451

Length

65 amino acids

Sequence
(BLAST)

1: MESPASSCVS SDAEVEMPMV VAGCPQCLMY MMLSDSEEEK QPKCPRCKSP VLLHFHKYWD TKNKT

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.