Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038666.1-P | Field mustard | plastid | 84.62 | 85.34 |
| Bra001413.1-P | Field mustard | plastid | 81.2 | 79.83 |
| CDX73863 | Canola | plastid | 81.2 | 79.83 |
| CDY08510 | Canola | nucleus, plastid | 73.5 | 72.88 |
| CDY01039 | Canola | mitochondrion, nucleus | 72.65 | 72.03 |
| Bra034826.1-P | Field mustard | plastid | 71.79 | 71.19 |
| KRH67976 | Soybean | nucleus, plastid | 58.97 | 63.3 |
| KRG96232 | Soybean | nucleus, plastid | 58.97 | 63.3 |
| AT5G06270.1 | Thale cress | mitochondrion, plastid | 65.81 | 63.11 |
| GSMUA_Achr8P07800_001 | Banana | cytosol, extracellular | 24.79 | 58.0 |
| TraesCS7D01G324300.1 | Wheat | cytosol | 27.35 | 49.23 |
| GSMUA_Achr8P16130_001 | Banana | cytosol | 42.73 | 48.54 |
| GSMUA_Achr11P... | Banana | nucleus | 43.59 | 47.66 |
| Zm00001d001776_P001 | Maize | cytosol, plastid | 32.48 | 47.5 |
| Solyc06g073990.1.1 | Tomato | nucleus, plastid | 47.86 | 47.06 |
| TraesCS2D01G379500.1 | Wheat | cytosol | 32.48 | 46.34 |
| TraesCS2B01G400400.1 | Wheat | cytosol | 32.48 | 45.78 |
| TraesCS2A01G296600.1 | Wheat | cytosol | 44.44 | 45.22 |
| TraesCS4B01G346800.1 | Wheat | plastid | 44.44 | 45.22 |
| TraesCS2D01G294500.1 | Wheat | cytosol | 44.44 | 45.22 |
| TraesCS2B01G312800.1 | Wheat | cytosol | 44.44 | 45.22 |
| TraesCS2A01G383200.1 | Wheat | cytosol | 31.62 | 45.12 |
| Zm00001d025361_P001 | Maize | nucleus | 42.73 | 45.05 |
| HORVU2Hr1G089140.1 | Barley | cytosol | 31.62 | 44.58 |
| GSMUA_Achr10P... | Banana | cytosol | 44.44 | 44.07 |
| GSMUA_Achr6P07030_001 | Banana | cytosol, plastid | 47.01 | 44.0 |
| EES10769 | Sorghum | mitochondrion | 42.73 | 43.48 |
| Os04t0684600-01 | Rice | cytosol | 29.91 | 43.21 |
| GSMUA_Achr6P19430_001 | Banana | nucleus | 42.73 | 43.1 |
| Zm00001d038287_P001 | Maize | mitochondrion | 47.86 | 42.75 |
| Os08t0102250-00 | Rice | cytosol | 24.79 | 42.65 |
| EES11682 | Sorghum | cytosol, plastid | 34.19 | 42.55 |
| PGSC0003DMT400015190 | Potato | nucleus, plastid | 44.44 | 42.28 |
| Os04t0415000-01 | Rice | cytosol | 41.88 | 42.24 |
| TraesCS2D01G597400.1 | Wheat | cytosol, plastid | 29.91 | 41.18 |
| PGSC0003DMT400050486 | Potato | cytosol, plastid | 41.03 | 40.68 |
| Os05t0442000-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 44.44 | 39.39 |
| TraesCS1D01G275300.1 | Wheat | nucleus | 44.44 | 39.1 |
| TraesCS3D01G368200.1 | Wheat | plastid | 41.88 | 38.89 |
| HORVU3Hr1G083720.1 | Barley | plastid | 41.88 | 38.89 |
| TraesCS1A01G275700.1 | Wheat | plastid | 44.44 | 38.81 |
| TraesCS3B01G407900.1 | Wheat | plastid | 41.88 | 38.58 |
| Os01t0863500-01 | Rice | plastid | 41.88 | 37.98 |
| TraesCS3A01G375700.1 | Wheat | plastid | 41.03 | 37.8 |
| Zm00001d003763_P001 | Maize | cytosol | 41.88 | 37.4 |
| Zm00001d042754_P001 | Maize | mitochondrion, plastid | 39.32 | 37.4 |
| GSMUA_Achr9P02640_001 | Banana | cytosol | 36.75 | 36.44 |
| Os02t0536500-01 | Rice | mitochondrion | 37.61 | 35.77 |
| HORVU2Hr1G073380.7 | Barley | cytosol, mitochondrion, nucleus, plastid | 41.88 | 34.75 |
| OQU87905 | Sorghum | mitochondrion, plastid | 34.19 | 33.9 |
| EES05192 | Sorghum | nucleus, plastid | 41.03 | 33.33 |
| VIT_08s0007g02600.t01 | Wine grape | plastid | 59.83 | 32.11 |
| Zm00001d016743_P001 | Maize | nucleus | 41.03 | 32.0 |
| HORVU1Hr1G074000.6 | Barley | mitochondrion | 43.59 | 31.48 |
| EES19598 | Sorghum | cytosol, plastid | 47.01 | 30.05 |
| TraesCS1B01G284900.1 | Wheat | extracellular, plastid, vacuole | 44.44 | 28.42 |
| GSMUA_Achr6P12990_001 | Banana | nucleus | 33.33 | 19.12 |
Protein Annotations
| MapMan:35.2 | EntrezGene:820333 | UniProt:A0A178VFZ0 | ProteinID:AAF02129.1 | ProteinID:AEE75072.1 | EMBL:AK117497 |
| ArrayExpress:AT3G11600 | EnsemblPlantsGene:AT3G11600 | RefSeq:AT3G11600 | TAIR:AT3G11600 | RefSeq:AT3G11600-TAIR-G | EnsemblPlants:AT3G11600.1 |
| TAIR:AT3G11600.1 | EMBL:AY085790 | EMBL:BT005174 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009653 | GO:GO:0009987 |
| GO:GO:0016874 | GO:GO:0030154 | GO:GO:0080147 | GO:GO:0080167 | RefSeq:NP_566393.1 | ProteinID:OAP04441.1 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33177 | PANTHER:PTHR33177:SF8 |
| UniProt:Q9SRN4 | UniParc:UPI000000C56D | SEG:seg | : | : | : |
Description
E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
Coordinates
chr3:+:3667205..3668303
Molecular Weight (calculated)
13040.6 Da
IEP (calculated)
9.490
GRAVY (calculated)
-0.662
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN
101: TTATAANTRR KKKTWWN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.