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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol, nucleus, mitochondrion

Predictor Summary:
  • mitochondrion 2
  • plastid 1
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G294500.1 Wheat cytosol 67.38 82.61
TraesCS2B01G312800.1 Wheat cytosol 66.67 81.74
TraesCS2A01G296600.1 Wheat cytosol 66.67 81.74
TraesCS4B01G346800.1 Wheat plastid 65.96 80.87
Zm00001d025361_P001 Maize nucleus 61.7 78.38
Os04t0415000-01 Rice cytosol 63.12 76.72
EES10769 Sorghum mitochondrion 61.7 75.65
Zm00001d003763_P001 Maize cytosol 62.41 67.18
GSMUA_Achr11P... Banana nucleus 41.84 55.14
GSMUA_Achr8P16130_001 Banana cytosol 39.72 54.37
KRH67976 Soybean nucleus, plastid 41.13 53.21
KRG96232 Soybean nucleus, plastid 40.43 52.29
AT5G06270.1 Thale cress mitochondrion, plastid 39.01 45.08
Solyc10g083140.1.1 Tomato plastid 21.28 44.12
Bra028737.1-P Field mustard plastid 37.59 43.8
Bra038666.1-P Field mustard plastid 35.46 43.1
CDY64732 Canola plastid 37.59 43.09
Bra009178.1-P Field mustard plastid 37.59 43.09
CDY47258 Canola plastid 36.88 42.98
CDX80998 Canola plastid 36.17 42.15
AT3G11600.1 Thale cress plastid 34.75 41.88
Bra005888.1-P Field mustard plastid 35.46 41.32
KRH22650 Soybean cytosol, plastid 31.21 41.12
CDY14087 Canola plastid 39.01 40.74
CDY04984 Canola plastid 38.3 40.0
CDY08510 Canola nucleus, plastid 33.33 39.83
Bra034826.1-P Field mustard plastid 33.33 39.83
PGSC0003DMT400072576 Potato plastid 29.79 39.62
Bra001413.1-P Field mustard plastid 33.33 39.5
CDX73863 Canola plastid 33.33 39.5
KRH25293 Soybean plastid 30.5 39.45
CDY01039 Canola mitochondrion, nucleus 32.62 38.98
GSMUA_Achr9P02640_001 Banana cytosol 32.62 38.98
HORVU2Hr1G089140.1 Barley cytosol 22.7 38.55
GSMUA_Achr6P07030_001 Banana cytosol, plastid 34.04 38.4
KRH30377 Soybean plastid 29.79 38.18
PGSC0003DMT400015190 Potato nucleus, plastid 32.62 37.4
Solyc01g007870.2.1 Tomato nucleus 33.33 37.3
KRH26665 Soybean plastid 26.95 36.89
PGSC0003DMT400042213 Potato cytosol 34.04 36.36
Solyc06g073990.1.1 Tomato nucleus, plastid 30.5 36.13
HORVU3Hr1G083720.1 Barley plastid 31.21 34.92
KRH22649 Soybean cytosol 16.31 34.33
KRH26667 Soybean nucleus, plastid 25.53 32.14
KRH26666 Soybean cytosol 24.82 30.97
PGSC0003DMT400050486 Potato cytosol, plastid 25.53 30.51
GSMUA_Achr6P12990_001 Banana nucleus 39.72 27.45
KRH22648 Soybean nucleus, plastid 23.4 27.27
HORVU1Hr1G074000.6 Barley mitochondrion 29.79 25.93
VIT_08s0007g02600.t01 Wine grape plastid 39.01 25.23
Protein Annotations
EnsemblPlants:HORVU2Hr1G073380.7EnsemblPlantsGene:HORVU2Hr1G073380PANTHER:PTHR33177PANTHER:PTHR33177:SF3SEG:segUniParc:UPI000B472A1F
UniProt:A0A287IFP1MapMan:35.2::::
Description
No Description!
Coordinates
chrchr2H:-:528384691..528390333
Molecular Weight (calculated)
15584.5 Da
IEP (calculated)
5.706
GRAVY (calculated)
-0.177
Length
141 amino acids
Sequence
(BLAST)
001: MSRSNRKSSS KGLDLKLNLS LPARGDSSNR AMADEESSPS SCLSSENEHG LQWSNSPEAT SMVLAACPRC FIYVMLPQDD PRCPQCKSPV LLDFLDCVDW
101: NGKHVTFISS RPNFVMLCEA AIVDGCVRFY VLSLSWITTN T
Best Arabidopsis Sequence Match ( AT5G06270.1 )
(BLAST)
001: MSRRSPKLEL KLNLSPPTSS QRRMVRSPSR SATTSPTSPP SSCVSSEMNQ DEPSVRYSTS PETTSMVLVG CPRCLMYVML SEDDPKCPKC KSTVLLDFLH
101: ENATNANANA AAASSGRKTR RN
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FNI1]
SUBAcon: [plastid,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.