CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
nucleus 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25293	Soybean	plastid	76.36	77.06
GSMUA_Achr8P07800_001	Banana	cytosol, extracellular	28.18	62.0
KRH67976	Soybean	nucleus, plastid	50.91	51.38
KRG96232	Soybean	nucleus, plastid	50.91	51.38
KRH22650	Soybean	cytosol, plastid	49.09	50.47
KRH22649	Soybean	cytosol	30.0	49.25
TraesCS7D01G324300.1	Wheat	cytosol	29.09	49.23
GSMUA_Achr11P...	Banana	nucleus	46.36	47.66
Os08t0102250-00	Rice	cytosol	29.09	47.06
Zm00001d001776_P001	Maize	cytosol, plastid	33.64	46.25
Os04t0684600-01	Rice	cytosol	33.64	45.68
KRH26665	Soybean	plastid	42.73	45.63
KRH22648	Soybean	nucleus, plastid	50.0	45.45
HORVU2Hr1G089140.1	Barley	cytosol	33.64	44.58
TraesCS2D01G379500.1	Wheat	cytosol	32.73	43.9
TraesCS2A01G383200.1	Wheat	cytosol	32.73	43.9
GSMUA_Achr8P16130_001	Banana	cytosol	40.91	43.69
TraesCS2B01G400400.1	Wheat	cytosol	32.73	43.37
EES11682	Sorghum	cytosol, plastid	36.36	42.55
KRH26667	Soybean	nucleus, plastid	42.73	41.96
KRH26666	Soybean	cytosol	42.73	41.59
Zm00001d025361_P001	Maize	nucleus	41.82	41.44
TraesCS2B01G312800.1	Wheat	cytosol	42.73	40.87
TraesCS2D01G294500.1	Wheat	cytosol	42.73	40.87
TraesCS2A01G296600.1	Wheat	cytosol	42.73	40.87
TraesCS4B01G346800.1	Wheat	plastid	42.73	40.87
GSMUA_Achr6P07030_001	Banana	cytosol, plastid	46.36	40.8
GSMUA_Achr10P...	Banana	cytosol	43.64	40.68
TraesCS2D01G597400.1	Wheat	cytosol, plastid	30.91	40.0
EES10769	Sorghum	mitochondrion	40.91	39.13
Zm00001d038287_P001	Maize	mitochondrion	46.36	38.93
TraesCS1A01G275700.1	Wheat	plastid	47.27	38.81
Os05t0442000-00	Rice	cytosol, mitochondrion, nucleus, plastid	46.36	38.64
TraesCS1D01G275300.1	Wheat	nucleus	46.36	38.35
GSMUA_Achr6P19430_001	Banana	nucleus	40.0	37.93
Os04t0415000-01	Rice	cytosol	39.09	37.07
TraesCS3A01G375700.1	Wheat	plastid	42.73	37.01
Zm00001d042754_P001	Maize	mitochondrion, plastid	40.91	36.59
HORVU3Hr1G083720.1	Barley	plastid	41.82	36.51
TraesCS3D01G368200.1	Wheat	plastid	41.82	36.51
Os01t0863500-01	Rice	plastid	42.73	36.43
TraesCS3B01G407900.1	Wheat	plastid	41.82	36.22
Zm00001d003763_P001	Maize	cytosol	42.73	35.88
GSMUA_Achr9P02640_001	Banana	cytosol	38.18	35.59
Os02t0536500-01	Rice	mitochondrion	37.27	33.33
OQU87905	Sorghum	mitochondrion, plastid	35.45	33.05
EES05192	Sorghum	nucleus, plastid	42.73	32.64
HORVU1Hr1G074000.6	Barley	mitochondrion	45.45	30.86
HORVU2Hr1G073380.7	Barley	cytosol, mitochondrion, nucleus, plastid	38.18	29.79
Zm00001d016743_P001	Maize	nucleus	39.09	28.67
EES19598	Sorghum	cytosol, plastid	47.27	28.42
TraesCS1B01G284900.1	Wheat	extracellular, plastid, vacuole	45.45	27.32
GSMUA_Achr6P12990_001	Banana	nucleus	33.64	18.14

Protein Annotations

EMBL:ACUP02007004	EnsemblPlants:KRH30377	EnsemblPlantsGene:GLYMA_11G180600	EntrezGene:100775986	PANTHER:PTHR33177	PANTHER:PTHR33177:SF11
ProteinID:KRH30377	ProteinID:KRH30377.1	SEG:seg	UniParc:UPI0000E649D1	UniProt:I1LKN5	MapMan:35.2

Description

hypothetical protein

Coordinates

chr11:-:24659746..24660620

Molecular Weight (calculated)

12014.4 Da

IEP (calculated)

6.467

GRAVY (calculated)

-0.323

Length

110 amino acids

Sequence
(BLAST)

001: MSKRVRSPRL ELRLNLSPPR AAATSIISSS ELSPTESSMS SPVSVQSLES SCVSSEAEET RAMLLVGCPR CLMYVMLSEV DPKCPKCKST VLLDFLNNEE
101: NNNTKKSSSE

Best Arabidopsis Sequence Match ( AT3G11600.1 )
(BLAST)

001: MSRRNKNGPK LELRLNLSPP PSQASQMSLV RSPNRSNTTS PSSCVSSETN QEENETITSM VLVGCPRCLM YVMLSDDDPK CPKCKSTVLL DFLQENAFAA
101: TTATAANTRR KKKTWWN

Arabidopsis Description

E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:Q9SRN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.