CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91301
KRG91356
KRG96232
KRG97103
KRG97374
KRG97837
KRG99095
KRH01102
KRH03247
KRH03601
KRH04634
KRH06355
KRH07108
KRH14738
KRH31032
KRH31544
KRH31661
KRH35470
KRH35520
KRH40151
KRH45896
KRH48783
KRH54345
KRH57111
KRH63594
KRH66562
KRH67976
KRH69115
KRH70713
KRH73429

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39760.1	KRG99095	AT1G26830.1	15618422
AT2G39760.1	KRH45896	AT1G26830.1	15618422
AT2G39760.1	KRH70713	AT1G26830.1	15618422
AT2G39760.1	KRG99095	AT1G26830.1	15659098
AT2G39760.1	KRH45896	AT1G26830.1	15659098
AT2G39760.1	KRH70713	AT1G26830.1	15659098
AT2G39760.1	KRG99095	AT1G26830.1	15772280
AT2G39760.1	KRH45896	AT1G26830.1	15772280
AT2G39760.1	KRH70713	AT1G26830.1	15772280
AT2G39760.1	KRH04634	AT1G52540.1	21798944
AT2G39760.1	KRG99095	AT1G69670.1	15618422
AT2G39760.1	KRH45896	AT1G69670.1	15618422
AT2G39760.1	KRH70713	AT1G69670.1	15618422
AT2G39760.1	KRG99095	AT1G69670.1	15659098
AT2G39760.1	KRH45896	AT1G69670.1	15659098
AT2G39760.1	KRH70713	AT1G69670.1	15659098
AT2G39760.1	KRG97837	AT2G39760.1	15618422
AT2G39760.1	KRH31032	AT2G39760.1	15618422
AT2G39760.1	KRG97837	AT2G39760.1	21798944
AT2G39760.1	KRH31032	AT2G39760.1	21798944
AT2G39760.1	KRG97374	AT3G23700.1	21798944
AT2G39760.1	KRH31544	AT3G23700.1	21798944
AT2G39760.1	KRH14738	AT3G43700.1	15618422
AT2G39760.1	KRH73429	AT3G43700.1	15618422
AT2G39760.1	KRH03247	AT3G54170.1	21798944
AT2G39760.1	KRH54345	AT3G54170.1	21798944
AT2G39760.1	KRH57111	AT3G54170.1	21798944
AT2G39760.1	KRH63594	AT3G54170.1	21798944
AT2G39760.1	KRH01102	AT3G60390.1	21798944
AT2G39760.1	KRH40151	AT3G60390.1	21798944
AT2G39760.1	KRH48783	AT3G60390.1	21798944
AT2G39760.1	KRH66562	AT3G60390.1	21798944
AT2G39760.1	KRG91356	AT4G14740.1	21798944
AT2G39760.1	KRH31661	AT4G14740.1	21798944
AT2G39760.1	KRH35470	AT4G14740.1	21798944
AT2G39760.1	KRH69115	AT4G14740.1	21798944
AT2G39760.1	KRG91301	AT4G14900.1	21798944
AT2G39760.1	KRH35520	AT4G14900.1	21798944
AT2G39760.1	KRG97103	AT4G22720.1	21798944
AT2G39760.1	KRH03601	AT4G22720.1	21798944
AT2G39760.1	KRG96232	AT5G06270.1	21798944
AT2G39760.1	KRH67976	AT5G06270.1	21798944
AT2G39760.1	KRH06355	AT5G14440.1	21798944
AT2G39760.1	KRH07108	AT5G14440.1	21798944
AT2G39760.1	KRH14738	AT5G21010.1	15618422
AT2G39760.1	KRH73429	AT5G21010.1	15618422

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31032	Soybean	nucleus	98.31	98.07
VIT_13s0019g02260.t01	Wine grape	cytosol	72.46	73.89
PGSC0003DMT400069942	Potato	cytosol	67.87	68.87
Solyc05g052960.2.1	Tomato	cytosol	67.87	68.87
Bra000147.1-P	Field mustard	cytosol	61.35	66.49
CDX93238	Canola	cytosol	62.56	65.4
Bra017053.1-P	Field mustard	cytosol	62.56	64.91
CDY07031	Canola	cytosol	62.32	64.66
CDY07638	Canola	cytosol	62.08	64.25
GSMUA_Achr7P10650_001	Banana	cytosol	62.8	64.2
AT2G39760.1	Thale cress	cytosol	63.04	63.97
Os07t0101400-01	Rice	cytosol	59.42	62.28
TraesCS2A01G255800.1	Wheat	cytosol	59.42	62.12
TraesCS2D01G266900.1	Wheat	cytosol	59.18	61.87
EER97813	Sorghum	plastid	59.18	60.95
CDY61778	Canola	cytosol	62.08	60.9
KRH67156	Soybean	plastid	56.28	56.83
KRH71465	Soybean	plastid	56.52	56.8
HORVU2Hr1G064920.1	Barley	plastid	58.94	56.74
GSMUA_Achr10P...	Banana	cytosol	25.85	56.61
KRG95474	Soybean	plastid	56.04	56.59
KRH31976	Soybean	plastid	56.28	56.42
KRH73429	Soybean	cytosol, plastid	53.14	55.56
KRH14738	Soybean	cytosol	52.66	55.05
KRG94057	Soybean	mitochondrion	24.15	54.64
KRG88616	Soybean	cytosol	30.43	53.85
Zm00001d007888_P002	Maize	plastid	54.83	52.79
KRG94896	Soybean	mitochondrion	53.86	51.62
KRH06640	Soybean	mitochondrion, plastid	54.11	51.61
KRG88614	Soybean	mitochondrion	38.65	51.28
KRG94047	Soybean	cytosol, mitochondrion, plastid	34.54	49.14
KRH06645	Soybean	cytosol	46.62	48.74
KRG94050	Soybean	mitochondrion	43.96	48.15
KRG88615	Soybean	mitochondrion	43.48	47.62
KRG94069	Soybean	cytosol	40.82	47.34
KRG94064	Soybean	mitochondrion	43.0	47.09
KRG94058	Soybean	mitochondrion	41.3	45.48
KRG94056	Soybean	cytosol	8.21	43.04
KRG94053	Soybean	cytosol	19.32	42.78
KRG94052	Soybean	cytosol	19.32	42.78
CDX93236	Canola	cytosol	39.61	40.2
KRH06646	Soybean	cytosol	27.29	37.05

Protein Annotations

Gene3D:1.25.40.420	EntrezGene:100786636	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EMBL:ACUP02010821
InterPro:BPM_C	InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_18G034700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	UniProt:K7MPP0	EnsemblPlants:KRG97837	ProteinID:KRG97837
ProteinID:KRG97837.1	ProteinID:KRG97838.1	ProteinID:KRG97839.1	ProteinID:KRG97840.1	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411	PANTHER:PTHR24411:SF54	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000233F57D	SEG:seg

Description

hypothetical protein

Coordinates

chr18:-:2689881..2695691

Molecular Weight (calculated)

46198.3 Da

IEP (calculated)

5.675

GRAVY (calculated)

-0.203

Length

414 amino acids

Sequence
(BLAST)

001: MAELEEERMG DFKPFSEGSS CSRSISETVN GSHQFTIKGY SLAKGMGAGK YIMSDTFTVG GYDWAIYFYP DGKNPEDNSM YVSVFIALAS DGTDVRALFK
101: LTLVDQSEKG NDKVHSHFDR PLESGPYTLK YKGSMWGYKR FFRRTQLETS EYLKNDCLVM HCTVGVVKTR FEGSKQGVIV PQSDMGRDFK DLLESEVGCD
201: ILFKVKSESF KAHKLILAAR SPVFRAQFFG LVGDPTLEEV VVEDIEPFIF KAMLLFVYSD KLPGIYEVMD SMPLCSYTVM VQHLLAAADL YNLDRLKLLC
301: ESKLCEEINT DNVATTLALA EQHHCPQLKA ICLKYIANPA NLGAVMQSEA FVHLKESCPS MLLELLETFA SVDDNSGQTL SRKRSGSSIY GQDLADGAAA
401: ESVNPNGRRV RRRT

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.