CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97374	Soybean	nucleus	86.79	88.62
VIT_05s0062g00830.t01	Wine grape	plastid	67.88	67.18
GSMUA_Achr11P...	Banana	mitochondrion	52.33	65.58
PGSC0003DMT400042869	Potato	plastid	61.66	61.82
CDX85123	Canola	plastid	58.29	60.16
Solyc09g097910.2.1	Tomato	nucleus	60.36	59.74
CDX77487	Canola	plastid	57.77	58.84
Bra014973.1-P	Field mustard	plastid	58.03	58.64
AT3G23700.1	Thale cress	plastid	57.25	56.38
EER90528	Sorghum	plastid	50.52	53.28
Zm00001d034828_P002	Maize	plastid	49.74	51.2
TraesCS5D01G532100.1	Wheat	plastid	48.19	50.27
TraesCS4A01G340600.1	Wheat	plastid	47.67	49.73
TraesCS5B01G534400.1	Wheat	plastid	46.89	42.09
Os03t0844900-01	Rice	plasma membrane	36.79	41.89
HORVU5Hr1G120650.5	Barley	nucleus	46.37	36.76
KRH55977	Soybean	cytosol, nucleus	4.92	12.18
KRH41145	Soybean	nucleus, plastid	22.28	11.91
KRH59845	Soybean	plastid	20.21	10.66

Protein Annotations

EntrezGene:100786308	Gene3D:2.40.50.140	MapMan:35.1	UniProt:A0A0R0HVK1	EMBL:ACUP02007146	EnsemblPlantsGene:GLYMA_11G252900
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	InterPro:IPR003029	EnsemblPlants:KRH31544	ProteinID:KRH31544
ProteinID:KRH31544.1	InterPro:NA-bd_OB-fold	PFAM:PF00575	PFscan:PS50126	PANTHER:PTHR23270	InterPro:S1_dom
InterPro:S1_domain	SMART:SM00316	SUPFAM:SSF50249	UniParc:UPI0006EDF8C1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr11:-:34379676..34383498

Molecular Weight (calculated)

43308.7 Da

IEP (calculated)

6.122

GRAVY (calculated)

-0.302

Length

386 amino acids

Sequence
(BLAST)

001: MPIFSASLGS FTSISFLSTS QSQSQSHLSP FKLTVKTPWQ WQHHHYLTSK VLVSASGNTQ IPNTELLQRP TPPDPLDDVR QARRSSDWKA AKTYQDSKLI
101: YNGRVEGFNS GGLLVRFYSI MGFLPFPQLS PVHASKEPEK SIQEIAQGLI GSIMSVKVIL ADEDNKKLIF SEKEAAWSKF SKQVNVGDIF EVRVGYVEDY
201: GAFVHLRFPD GLYRLTGLIH VSEVSWDLIQ DVRDILKVGD EVRVKVVGID CYCRGKSRIN LSIRQLEEDP LLETLDKVIP QDGSADPDSM SGGDSGSIEP
301: LPGLETILEE LLQEDGIYDV RISRQGFEKR VVSQDLQLWL CNAPPTNQRF TLLARAGRQV QEIHLTTSLD QEGIKKALQR VLERVP

Best Arabidopsis Sequence Match ( AT3G23700.1 )
(BLAST)

001: MAVFSGATTL GSVSFASHLF DQQSTFLSCP LRLLPSSSSS SSNRNSLVCI VKSFSSSATA DTDRNSDQSA SSSVLSASNS LLRDTSDEAS AAGPSDWKTA
101: KAYCKSGDTF EGEVQGFNGG GLLIRFHSLV GFLPYPQLSP SRSCKEPQKS IHEIAKTLVG SKLPVKVVQA DEENRKLILS EKLALWPKYS QNVNVGDVFN
201: GRVGSVEDYG AFIHLRFDDG LYHLTGLVHV SEVSWDYVQD VRDVLRDGDE VRVIVTNIDK EKSRITLSIK QLEDDPLLET LDKVILKDSS TGSPSLSSNN
301: GDTIEPLPGL ETILEELLKE DGIEAVKINR QGFEKRVVSQ DLQLWLSNTP PSDGKFVLLA RAGRQVQEIH LTTSLEQGGI KKALQHVLER VP

Arabidopsis Description

At3g23700/MYM9_3 [Source:UniProtKB/TrEMBL;Acc:Q9LK47]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.