CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59845	Soybean	plastid	71.15	15.16
KRH41145	Soybean	nucleus, plastid	69.23	14.96
VIT_02s0025g03970.t01	Wine grape	plastid	43.59	8.8
GSMUA_Achr1P17520_001	Banana	nucleus, plastid	39.74	8.62
Solyc08g007950.2.1	Tomato	plastid	44.87	7.93
TraesCS6D01G047400.1	Wheat	nucleus, plastid	37.18	7.69
TraesCS6B01G056100.1	Wheat	nucleus, plastid	37.18	7.69
TraesCS6A01G041000.1	Wheat	nucleus, plastid	37.18	7.69
EES04357	Sorghum	nucleus, plastid	39.1	7.68
Os02t0115600-01	Rice	plastid	39.1	7.63
HORVU6Hr1G008590.12	Barley	nucleus	36.54	7.46
CDY60261	Canola	plastid	34.62	7.46
CDX98043	Canola	plastid	34.62	7.43
Zm00001d014991_P004	Maize	plastid	37.18	7.33
Bra019788.1-P	Field mustard	plastid	33.97	7.26
AT1G12800.1	Thale cress	plastid	34.62	7.04
KRH31544	Soybean	plastid	12.18	4.92
KRG97374	Soybean	nucleus	11.54	4.76
CDY31279	Canola	cytosol	5.13	4.47

Protein Annotations

MapMan:35.2	EMBL:ACUP02004075	EnsemblPlantsGene:GLYMA_06G293800	GO:GO:0000462	GO:GO:0000466	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005730	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0032040	UniProt:K7KY40	EnsemblPlants:KRH55977	ProteinID:KRH55977	ProteinID:KRH55977.1	PANTHER:PTHR23270
PANTHER:PTHR23270:SF7	UniParc:UPI000296956A	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:48260870..48261621

Molecular Weight (calculated)

17575.3 Da

IEP (calculated)

4.687

GRAVY (calculated)

-0.760

Length

156 amino acids

Sequence
(BLAST)

001: GLEQHEQRQL EFHEEPNDLC QLSDLKSDDS RVELSAEAAL QAKPKRLDKY VKQTSKFVGE EGASRNIGGH TNNDDLGKIV DMSDFQESED ADWTRTRDLI
101: KTGDREDVEL VSCNTKGFIV SFGSLAGFLP YHNLASKWKF LASESWLKQK GLDPSI

Best Arabidopsis Sequence Match ( AT1G12800.1 )
(BLAST)

001: MDVLALSSSA SAAAPSASLA GKFLSFPSRV RVRRNRENLL AKQKKFLVSA SKREEPKLNE WDQMELNFGR LLGEDPKLTL AKIVARKVDP EASFIDIEKS
101: FYKNKGKIPE VEEIPLDWSK DNKKKSTSSL DGLKLVKPVL KDGVKFERPV MKKPSPVLKK PLVEAVAAPK VQRLPNVILR KPSSFYTSNG DDEESKLRLK
201: PNLTLKMRNE RENERFSDMT LLRKPEPVSV VAEEEDKPLS DDLTMEEGEQ EGGTYSQYTL LEKPEARLQP VNVEEEVGDS GGVESSEIVN NSIQKPEARP
301: ELENIEKEVA DSGVLESSEI ENNSIPTEMQ LNSEMSSEEK TINSDPLERI PSKPISQTIV EASLQGKPQR LDPSSAEPSV PNIGKPSVVN HEGRQVSVEL
401: KGPPTRSSLE ENDWNKAESL VKTELRADVE LISSSTRGFA VSYGSLIGFL PYRNLAAKWK FLAFESWLRR KGVDPSPYRQ NLGVIGGQDV TSKSPSPDSS
501: LDSEVATTIN GEVSSDMKLE DLLMVYDREK QKFLSSFVGQ KIKVNVVMAN RNSRKLIFSM RPRENEEEVE KKRTLMAKLR VGDVVKCCIK KITYFGIFCE
601: LEGVPALVHQ SEVSWDATLD PASYFKIGQI VEAKVHQLDF ALERIFLSLK EITPDPLTEA LESVVGGDND QLGGRLQAAE LDAEWPDVES LIKELEMVEG
701: IQSVSKSRFF LSPGLAPTFQ VYMAPMFENQ YKLLARAGNR VQELIVEASL SKEEMKSTIM SCTNRVE

Arabidopsis Description

Nucleic acid-binding, OB-fold-like protein [Source:UniProtKB/TrEMBL;Acc:Q94AJ9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.