Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G041000.1 | Wheat | nucleus, plastid | 96.15 | 96.15 |
| TraesCS6D01G047400.1 | Wheat | nucleus, plastid | 95.89 | 95.89 |
| HORVU6Hr1G008590.12 | Barley | nucleus | 85.68 | 84.56 |
| Os02t0115600-01 | Rice | plastid | 68.44 | 64.58 |
| EES04357 | Sorghum | nucleus, plastid | 64.59 | 61.34 |
| Zm00001d014991_P004 | Maize | plastid | 61.67 | 58.79 |
| GSMUA_Achr1P17520_001 | Banana | nucleus, plastid | 40.19 | 42.14 |
| CDY31279 | Canola | cytosol | 9.42 | 39.66 |
| CDX98043 | Canola | plastid | 37.14 | 38.51 |
| KRH41145 | Soybean | nucleus, plastid | 36.87 | 38.5 |
| CDY60261 | Canola | plastid | 36.87 | 38.4 |
| Bra019788.1-P | Field mustard | plastid | 36.87 | 38.08 |
| VIT_02s0025g03970.t01 | Wine grape | plastid | 38.73 | 37.77 |
| KRH55977 | Soybean | cytosol, nucleus | 7.69 | 37.18 |
| AT1G12800.1 | Thale cress | plastid | 37.27 | 36.64 |
| KRH59845 | Soybean | plastid | 34.22 | 35.25 |
| Solyc08g007950.2.1 | Tomato | plastid | 37.0 | 31.6 |
| TraesCS5B01G534400.1 | Wheat | plastid | 12.07 | 21.16 |
Protein Annotations
| Gene3D:2.40.50.140 | MapMan:35.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0019843 | GO:GO:0034337 | GO:GO:1901259 | InterPro:IPR003029 | InterPro:NA-bd_OB-fold | PFAM:PF00575 |
| PFscan:PS50126 | PANTHER:PTHR23270 | PANTHER:PTHR23270:SF7 | InterPro:S1_dom | InterPro:S1_domain | SMART:SM00316 |
| SUPFAM:SSF50249 | EnsemblPlantsGene:TraesCS6B01G056100 | EnsemblPlants:TraesCS6B01G056100.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6B:+:36205041..36210128
Molecular Weight (calculated)
83251.9 Da
IEP (calculated)
4.856
GRAVY (calculated)
-0.456
Length
754 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAFAAAPAA GVFASARPSV ALRRRGSSRG ASSSSSRAGA GRVRLVRPLP PPRAVGGDGG GDLPALDKWD MMELEFGRFL GEDPKLTLAK ILLKKSDPDA
101: SSLDVEKLVA SKKDTLDVIL KEFMEANKQD KTATAGEAIS APMKDKQPLG VSRPALSKPK LDEASLAMIR PAGSKPKQVE PPLTFVRPAA IKPKVNKPSL
201: TLMRPMGSKP KVQAKLVQDS WPSKESLAAG TETSEVGSTV TEDLVDVTLR KPVVHQSEDD EQEPELKMKP NVDLKMRKDM DEDLSNISLL QKPEATKETA
301: KALDSTVVAA GEDTNEREEG LQPSEESLPQ QIDSPALDNP SVTDNNFSMQ AFLQGRPRKD LPVETSPSQV DAENKSDSDD KKSYVDDGGN VLSSTLEDIT
401: ESDWTRLEHY ASTGERVEVE LINCSAKGFV VSLDSMIGFL PYRNLATKWK FLAFETWLRR KGGDPSLYKQ SMSMEEGSEV NDRSIETESV SEVAHQDQGT
501: LQSRLKFEEL LRTYDEEKSK FLSSFIGQRL RVSVVLADRN SKRLFFSMRP KESDELIQKR KSLMAKLNVG DIVTCTIKRF VYFGIFVEVE GVPALIQQWE
601: VSWDETLDPS VSYRIGQVVD AKVIQLDFNN SRIFLSLKDV KPSPPVGALE AVIGDEASLD GSLEPAQADF EWPEVDSLIE ELKNIEQVKD VYKGRFFRSP
701: GLAPTFQVYM ASLVGQKYKV LARYGNNVQE VMVETSLDKE GLKEAILMCT NRVS
101: SSLDVEKLVA SKKDTLDVIL KEFMEANKQD KTATAGEAIS APMKDKQPLG VSRPALSKPK LDEASLAMIR PAGSKPKQVE PPLTFVRPAA IKPKVNKPSL
201: TLMRPMGSKP KVQAKLVQDS WPSKESLAAG TETSEVGSTV TEDLVDVTLR KPVVHQSEDD EQEPELKMKP NVDLKMRKDM DEDLSNISLL QKPEATKETA
301: KALDSTVVAA GEDTNEREEG LQPSEESLPQ QIDSPALDNP SVTDNNFSMQ AFLQGRPRKD LPVETSPSQV DAENKSDSDD KKSYVDDGGN VLSSTLEDIT
401: ESDWTRLEHY ASTGERVEVE LINCSAKGFV VSLDSMIGFL PYRNLATKWK FLAFETWLRR KGGDPSLYKQ SMSMEEGSEV NDRSIETESV SEVAHQDQGT
501: LQSRLKFEEL LRTYDEEKSK FLSSFIGQRL RVSVVLADRN SKRLFFSMRP KESDELIQKR KSLMAKLNVG DIVTCTIKRF VYFGIFVEVE GVPALIQQWE
601: VSWDETLDPS VSYRIGQVVD AKVIQLDFNN SRIFLSLKDV KPSPPVGALE AVIGDEASLD GSLEPAQADF EWPEVDSLIE ELKNIEQVKD VYKGRFFRSP
701: GLAPTFQVYM ASLVGQKYKV LARYGNNVQE VMVETSLDKE GLKEAILMCT NRVS
001: MDVLALSSSA SAAAPSASLA GKFLSFPSRV RVRRNRENLL AKQKKFLVSA SKREEPKLNE WDQMELNFGR LLGEDPKLTL AKIVARKVDP EASFIDIEKS
101: FYKNKGKIPE VEEIPLDWSK DNKKKSTSSL DGLKLVKPVL KDGVKFERPV MKKPSPVLKK PLVEAVAAPK VQRLPNVILR KPSSFYTSNG DDEESKLRLK
201: PNLTLKMRNE RENERFSDMT LLRKPEPVSV VAEEEDKPLS DDLTMEEGEQ EGGTYSQYTL LEKPEARLQP VNVEEEVGDS GGVESSEIVN NSIQKPEARP
301: ELENIEKEVA DSGVLESSEI ENNSIPTEMQ LNSEMSSEEK TINSDPLERI PSKPISQTIV EASLQGKPQR LDPSSAEPSV PNIGKPSVVN HEGRQVSVEL
401: KGPPTRSSLE ENDWNKAESL VKTELRADVE LISSSTRGFA VSYGSLIGFL PYRNLAAKWK FLAFESWLRR KGVDPSPYRQ NLGVIGGQDV TSKSPSPDSS
501: LDSEVATTIN GEVSSDMKLE DLLMVYDREK QKFLSSFVGQ KIKVNVVMAN RNSRKLIFSM RPRENEEEVE KKRTLMAKLR VGDVVKCCIK KITYFGIFCE
601: LEGVPALVHQ SEVSWDATLD PASYFKIGQI VEAKVHQLDF ALERIFLSLK EITPDPLTEA LESVVGGDND QLGGRLQAAE LDAEWPDVES LIKELEMVEG
701: IQSVSKSRFF LSPGLAPTFQ VYMAPMFENQ YKLLARAGNR VQELIVEASL SKEEMKSTIM SCTNRVE
101: FYKNKGKIPE VEEIPLDWSK DNKKKSTSSL DGLKLVKPVL KDGVKFERPV MKKPSPVLKK PLVEAVAAPK VQRLPNVILR KPSSFYTSNG DDEESKLRLK
201: PNLTLKMRNE RENERFSDMT LLRKPEPVSV VAEEEDKPLS DDLTMEEGEQ EGGTYSQYTL LEKPEARLQP VNVEEEVGDS GGVESSEIVN NSIQKPEARP
301: ELENIEKEVA DSGVLESSEI ENNSIPTEMQ LNSEMSSEEK TINSDPLERI PSKPISQTIV EASLQGKPQR LDPSSAEPSV PNIGKPSVVN HEGRQVSVEL
401: KGPPTRSSLE ENDWNKAESL VKTELRADVE LISSSTRGFA VSYGSLIGFL PYRNLAAKWK FLAFESWLRR KGVDPSPYRQ NLGVIGGQDV TSKSPSPDSS
501: LDSEVATTIN GEVSSDMKLE DLLMVYDREK QKFLSSFVGQ KIKVNVVMAN RNSRKLIFSM RPRENEEEVE KKRTLMAKLR VGDVVKCCIK KITYFGIFCE
601: LEGVPALVHQ SEVSWDATLD PASYFKIGQI VEAKVHQLDF ALERIFLSLK EITPDPLTEA LESVVGGDND QLGGRLQAAE LDAEWPDVES LIKELEMVEG
701: IQSVSKSRFF LSPGLAPTFQ VYMAPMFENQ YKLLARAGNR VQELIVEASL SKEEMKSTIM SCTNRVE
Arabidopsis Description
Nucleic acid-binding, OB-fold-like protein [Source:UniProtKB/TrEMBL;Acc:Q94AJ9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.