Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98043 | Canola | plastid | 91.3 | 90.92 |
| Bra019788.1-P | Field mustard | plastid | 90.61 | 89.86 |
| AT1G12800.1 | Thale cress | plastid | 77.9 | 73.53 |
| CDY31279 | Canola | cytosol | 16.99 | 68.72 |
| VIT_02s0025g03970.t01 | Wine grape | plastid | 53.45 | 50.06 |
| KRH41145 | Soybean | nucleus, plastid | 48.62 | 48.75 |
| GSMUA_Achr1P17520_001 | Banana | nucleus, plastid | 45.72 | 46.04 |
| KRH59845 | Soybean | plastid | 46.13 | 45.63 |
| Solyc08g007950.2.1 | Tomato | plastid | 51.52 | 42.24 |
| TraesCS6A01G041000.1 | Wheat | nucleus, plastid | 38.81 | 37.27 |
| Zm00001d014991_P004 | Maize | plastid | 40.61 | 37.17 |
| EES04357 | Sorghum | nucleus, plastid | 40.61 | 37.03 |
| TraesCS6B01G056100.1 | Wheat | nucleus, plastid | 38.4 | 36.87 |
| TraesCS6D01G047400.1 | Wheat | nucleus, plastid | 38.12 | 36.6 |
| Os02t0115600-01 | Rice | plastid | 40.06 | 36.3 |
| KRH55977 | Soybean | cytosol, nucleus | 7.46 | 34.62 |
| HORVU6Hr1G008590.12 | Barley | nucleus | 35.5 | 33.64 |
| CDX77487 | Canola | plastid | 12.43 | 23.75 |
| CDX85123 | Canola | plastid | 11.88 | 22.99 |
Protein Annotations
| EnsemblPlants:CDY60261 | EnsemblPlantsGene:GSBRNA2T00028393001 | Gene3D:2.40.50.140 | GO:A0A078J322 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR003029 | InterPro:NA-bd_OB-fold | InterPro:S1_dom | InterPro:S1_domain | PANTHER:PTHR23270 |
| PANTHER:PTHR23270:SF7 | PFAM:PF00575 | PFscan:PS50126 | ProteinID:CDY60261 | ProteinID:CDY60261.1 | SEG:seg |
| SMART:SM00316 | SUPFAM:SSF50249 | UniParc:UPI0004EEE9C7 | UniProt:A0A078J322 | MapMan:35.2 | : |
Description
BnaC05g49260DBnaC05g49260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J322]
Coordinates
chrLK033861:+:13730..17262
Molecular Weight (calculated)
80811.1 Da
IEP (calculated)
4.907
GRAVY (calculated)
-0.505
Length
724 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVLAFSSSA SAAVLFPSSV RLRRNVQAKH KRFVVSASKR EEPKLSEWDQ MELKFGRLLG EDPKLTLAKI VARKVNPEAS FVEVEKSFYK NKGKLPDIES
101: IPLDGSKEDT KTKKKPTSPS LDGLNLVKPV PRDGVKFEAS DKPVVKKPNF SLKKPLDAAA AATPPKRTLP NVILRKPSSY YVNNEEEDES KLRLKRNLTL
201: KMRNDRENGR FSDMTLLRKP EPVSVNAEEE SPEDKVLSDG LTVEEDVVYS EYTLLEKPEA RPEPENVDEE AVELPEIEDT SAPTEMQLES DTSSDSSEEE
301: TINSDPVERT PSNPVSQTTV EASLQGKPQR LDPSSAEPSV SNRGQPVTLN QEGSQVSIEL KGPPTRSSLE ESDWIKAESL VKTELRADVE LISSSTRGFA
401: VSYGSLIGFL PYRNLAAKWK FLAFESWLRR KGVDPSLYRQ NLGVIGGQDV KAPSPDSSLA GSEVSNAVNG EVSSDMKLED LLMVYDREKQ KFLSSFVGQK
501: IKVNVVMANR SSRKLMFSMR PRENEEEVEK KRNLMAKLRV GDVVKCCIKK ITYFGIFCEL EGVPALIHQS EVSWDATLDP ASYFKIGQIV EAKVHQLDFA
601: LERIFLSLKE ITPDPLTEAL ESVVGDNDQL GKLQAAELDA EWPDVESLIK EMEMVEGIQS VSKGRFFLSP GLAPTFQVYM APMFENQYKL LARAGNRVQE
701: LIVEASLSKE EMKTTIMSCT NRVE
101: IPLDGSKEDT KTKKKPTSPS LDGLNLVKPV PRDGVKFEAS DKPVVKKPNF SLKKPLDAAA AATPPKRTLP NVILRKPSSY YVNNEEEDES KLRLKRNLTL
201: KMRNDRENGR FSDMTLLRKP EPVSVNAEEE SPEDKVLSDG LTVEEDVVYS EYTLLEKPEA RPEPENVDEE AVELPEIEDT SAPTEMQLES DTSSDSSEEE
301: TINSDPVERT PSNPVSQTTV EASLQGKPQR LDPSSAEPSV SNRGQPVTLN QEGSQVSIEL KGPPTRSSLE ESDWIKAESL VKTELRADVE LISSSTRGFA
401: VSYGSLIGFL PYRNLAAKWK FLAFESWLRR KGVDPSLYRQ NLGVIGGQDV KAPSPDSSLA GSEVSNAVNG EVSSDMKLED LLMVYDREKQ KFLSSFVGQK
501: IKVNVVMANR SSRKLMFSMR PRENEEEVEK KRNLMAKLRV GDVVKCCIKK ITYFGIFCEL EGVPALIHQS EVSWDATLDP ASYFKIGQIV EAKVHQLDFA
601: LERIFLSLKE ITPDPLTEAL ESVVGDNDQL GKLQAAELDA EWPDVESLIK EMEMVEGIQS VSKGRFFLSP GLAPTFQVYM APMFENQYKL LARAGNRVQE
701: LIVEASLSKE EMKTTIMSCT NRVE
001: MDVLALSSSA SAAAPSASLA GKFLSFPSRV RVRRNRENLL AKQKKFLVSA SKREEPKLNE WDQMELNFGR LLGEDPKLTL AKIVARKVDP EASFIDIEKS
101: FYKNKGKIPE VEEIPLDWSK DNKKKSTSSL DGLKLVKPVL KDGVKFERPV MKKPSPVLKK PLVEAVAAPK VQRLPNVILR KPSSFYTSNG DDEESKLRLK
201: PNLTLKMRNE RENERFSDMT LLRKPEPVSV VAEEEDKPLS DDLTMEEGEQ EGGTYSQYTL LEKPEARLQP VNVEEEVGDS GGVESSEIVN NSIQKPEARP
301: ELENIEKEVA DSGVLESSEI ENNSIPTEMQ LNSEMSSEEK TINSDPLERI PSKPISQTIV EASLQGKPQR LDPSSAEPSV PNIGKPSVVN HEGRQVSVEL
401: KGPPTRSSLE ENDWNKAESL VKTELRADVE LISSSTRGFA VSYGSLIGFL PYRNLAAKWK FLAFESWLRR KGVDPSPYRQ NLGVIGGQDV TSKSPSPDSS
501: LDSEVATTIN GEVSSDMKLE DLLMVYDREK QKFLSSFVGQ KIKVNVVMAN RNSRKLIFSM RPRENEEEVE KKRTLMAKLR VGDVVKCCIK KITYFGIFCE
601: LEGVPALVHQ SEVSWDATLD PASYFKIGQI VEAKVHQLDF ALERIFLSLK EITPDPLTEA LESVVGGDND QLGGRLQAAE LDAEWPDVES LIKELEMVEG
701: IQSVSKSRFF LSPGLAPTFQ VYMAPMFENQ YKLLARAGNR VQELIVEASL SKEEMKSTIM SCTNRVE
101: FYKNKGKIPE VEEIPLDWSK DNKKKSTSSL DGLKLVKPVL KDGVKFERPV MKKPSPVLKK PLVEAVAAPK VQRLPNVILR KPSSFYTSNG DDEESKLRLK
201: PNLTLKMRNE RENERFSDMT LLRKPEPVSV VAEEEDKPLS DDLTMEEGEQ EGGTYSQYTL LEKPEARLQP VNVEEEVGDS GGVESSEIVN NSIQKPEARP
301: ELENIEKEVA DSGVLESSEI ENNSIPTEMQ LNSEMSSEEK TINSDPLERI PSKPISQTIV EASLQGKPQR LDPSSAEPSV PNIGKPSVVN HEGRQVSVEL
401: KGPPTRSSLE ENDWNKAESL VKTELRADVE LISSSTRGFA VSYGSLIGFL PYRNLAAKWK FLAFESWLRR KGVDPSPYRQ NLGVIGGQDV TSKSPSPDSS
501: LDSEVATTIN GEVSSDMKLE DLLMVYDREK QKFLSSFVGQ KIKVNVVMAN RNSRKLIFSM RPRENEEEVE KKRTLMAKLR VGDVVKCCIK KITYFGIFCE
601: LEGVPALVHQ SEVSWDATLD PASYFKIGQI VEAKVHQLDF ALERIFLSLK EITPDPLTEA LESVVGGDND QLGGRLQAAE LDAEWPDVES LIKELEMVEG
701: IQSVSKSRFF LSPGLAPTFQ VYMAPMFENQ YKLLARAGNR VQELIVEASL SKEEMKSTIM SCTNRVE
Arabidopsis Description
Nucleic acid-binding, OB-fold-like protein [Source:UniProtKB/TrEMBL;Acc:Q94AJ9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.