Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019788.1-P | Field mustard | plastid | 97.25 | 96.85 |
| CDY60261 | Canola | plastid | 90.92 | 91.3 |
| AT1G12800.1 | Thale cress | plastid | 76.75 | 72.75 |
| CDY31279 | Canola | cytosol | 17.19 | 69.83 |
| VIT_02s0025g03970.t01 | Wine grape | plastid | 52.82 | 49.68 |
| KRH41145 | Soybean | nucleus, plastid | 48.28 | 48.62 |
| GSMUA_Achr1P17520_001 | Banana | nucleus, plastid | 45.53 | 46.04 |
| KRH59845 | Soybean | plastid | 45.94 | 45.63 |
| Solyc08g007950.2.1 | Tomato | plastid | 51.86 | 42.7 |
| Zm00001d014991_P004 | Maize | plastid | 41.13 | 37.8 |
| TraesCS6A01G041000.1 | Wheat | nucleus, plastid | 38.93 | 37.53 |
| TraesCS6B01G056100.1 | Wheat | nucleus, plastid | 38.51 | 37.14 |
| TraesCS6D01G047400.1 | Wheat | nucleus, plastid | 38.24 | 36.87 |
| EES04357 | Sorghum | nucleus, plastid | 40.17 | 36.78 |
| Os02t0115600-01 | Rice | plastid | 40.03 | 36.42 |
| KRH55977 | Soybean | cytosol, nucleus | 7.43 | 34.62 |
| HORVU6Hr1G008590.12 | Barley | nucleus | 35.35 | 33.64 |
| CDX77487 | Canola | plastid | 12.52 | 24.01 |
| CDX85123 | Canola | plastid | 11.97 | 23.26 |
Protein Annotations
| EnsemblPlants:CDX98043 | EnsemblPlantsGene:GSBRNA2T00105413001 | Gene3D:2.40.50.140 | GO:A0A078EFD6 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR003029 | InterPro:NA-bd_OB-fold | InterPro:S1_dom | InterPro:S1_domain | PANTHER:PTHR23270 |
| PANTHER:PTHR23270:SF7 | PFAM:PF00575 | PFscan:PS50126 | ProteinID:CDX98043 | ProteinID:CDX98043.1 | SEG:seg |
| SMART:SM00316 | SUPFAM:SSF50249 | UniParc:UPI0004EE709D | MapMan:35.2 | : | : |
Description
BnaA06g07940D
Coordinates
chrLK031902:+:665202..668625
Molecular Weight (calculated)
81127.6 Da
IEP (calculated)
4.842
GRAVY (calculated)
-0.466
Length
727 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVIALSSSA SAAVSIAGSF PLFPSSVGLR RNVQAKHKRF VVSASKREEP KLSEWDQMEL KFGRLLGEDP KLTLAKIVAR KVNPEASFVE VEKSFYKNKG
101: KLPDIESIPL DWSKEDTKTK KKPTSLDGLN LVKPVPRDGV KFEASDKPVV KKPNFSLKKP LDAAPVATPP PKRTLPNVIL RKPSSYYVSN DDDEESKLRL
201: KRNLTLKMRN DRENERFSDM TLLRKPEPVS VNAEEESPED KVLSDGLTVE EDVVYSEYTL LEKPEARPEP ENVDEEAVEV PEIEDTSAPT EMQLESDTSS
301: DSSEEETINS DPVERTPVSQ TIVEASLQGK PQRLDPSSAE PSVSNRGQPV TLNQEGSQVS IELKGPPTRS SLEESDWIKA ESLVKTELRA DVELISSSTR
401: GFAVSYGSLI GFLPYRNLAA KWKFLAFESW LRRKGVDPSL YRQNLGVIGG QDVKAPSPDA SLAASEVGNA VNGEVSSDMK LEDLLMVYDR EKQKFLSSFV
501: GQKIKVNVVM ANRNSRKLIF SMRPRENEEE VEKKRNLMAK LRVGDVVKCC IKKITYFGIF CELEGVPALI HQSEVSWDAT LDPASYFKIG QIVEAKVHQL
601: DFALERIFLS LKEITPDPLT EALESVVGDN DQLGKLQAAE LDAEWPDVES LIKEMEMVEG IQSVSKGRFF LSPGLAPTFQ VYMAPMFENQ YKLLARAGNR
701: VQELIVEASL SKEEMKTTIM SCTNRVE
101: KLPDIESIPL DWSKEDTKTK KKPTSLDGLN LVKPVPRDGV KFEASDKPVV KKPNFSLKKP LDAAPVATPP PKRTLPNVIL RKPSSYYVSN DDDEESKLRL
201: KRNLTLKMRN DRENERFSDM TLLRKPEPVS VNAEEESPED KVLSDGLTVE EDVVYSEYTL LEKPEARPEP ENVDEEAVEV PEIEDTSAPT EMQLESDTSS
301: DSSEEETINS DPVERTPVSQ TIVEASLQGK PQRLDPSSAE PSVSNRGQPV TLNQEGSQVS IELKGPPTRS SLEESDWIKA ESLVKTELRA DVELISSSTR
401: GFAVSYGSLI GFLPYRNLAA KWKFLAFESW LRRKGVDPSL YRQNLGVIGG QDVKAPSPDA SLAASEVGNA VNGEVSSDMK LEDLLMVYDR EKQKFLSSFV
501: GQKIKVNVVM ANRNSRKLIF SMRPRENEEE VEKKRNLMAK LRVGDVVKCC IKKITYFGIF CELEGVPALI HQSEVSWDAT LDPASYFKIG QIVEAKVHQL
601: DFALERIFLS LKEITPDPLT EALESVVGDN DQLGKLQAAE LDAEWPDVES LIKEMEMVEG IQSVSKGRFF LSPGLAPTFQ VYMAPMFENQ YKLLARAGNR
701: VQELIVEASL SKEEMKTTIM SCTNRVE
001: MDVLALSSSA SAAAPSASLA GKFLSFPSRV RVRRNRENLL AKQKKFLVSA SKREEPKLNE WDQMELNFGR LLGEDPKLTL AKIVARKVDP EASFIDIEKS
101: FYKNKGKIPE VEEIPLDWSK DNKKKSTSSL DGLKLVKPVL KDGVKFERPV MKKPSPVLKK PLVEAVAAPK VQRLPNVILR KPSSFYTSNG DDEESKLRLK
201: PNLTLKMRNE RENERFSDMT LLRKPEPVSV VAEEEDKPLS DDLTMEEGEQ EGGTYSQYTL LEKPEARLQP VNVEEEVGDS GGVESSEIVN NSIQKPEARP
301: ELENIEKEVA DSGVLESSEI ENNSIPTEMQ LNSEMSSEEK TINSDPLERI PSKPISQTIV EASLQGKPQR LDPSSAEPSV PNIGKPSVVN HEGRQVSVEL
401: KGPPTRSSLE ENDWNKAESL VKTELRADVE LISSSTRGFA VSYGSLIGFL PYRNLAAKWK FLAFESWLRR KGVDPSPYRQ NLGVIGGQDV TSKSPSPDSS
501: LDSEVATTIN GEVSSDMKLE DLLMVYDREK QKFLSSFVGQ KIKVNVVMAN RNSRKLIFSM RPRENEEEVE KKRTLMAKLR VGDVVKCCIK KITYFGIFCE
601: LEGVPALVHQ SEVSWDATLD PASYFKIGQI VEAKVHQLDF ALERIFLSLK EITPDPLTEA LESVVGGDND QLGGRLQAAE LDAEWPDVES LIKELEMVEG
701: IQSVSKSRFF LSPGLAPTFQ VYMAPMFENQ YKLLARAGNR VQELIVEASL SKEEMKSTIM SCTNRVE
101: FYKNKGKIPE VEEIPLDWSK DNKKKSTSSL DGLKLVKPVL KDGVKFERPV MKKPSPVLKK PLVEAVAAPK VQRLPNVILR KPSSFYTSNG DDEESKLRLK
201: PNLTLKMRNE RENERFSDMT LLRKPEPVSV VAEEEDKPLS DDLTMEEGEQ EGGTYSQYTL LEKPEARLQP VNVEEEVGDS GGVESSEIVN NSIQKPEARP
301: ELENIEKEVA DSGVLESSEI ENNSIPTEMQ LNSEMSSEEK TINSDPLERI PSKPISQTIV EASLQGKPQR LDPSSAEPSV PNIGKPSVVN HEGRQVSVEL
401: KGPPTRSSLE ENDWNKAESL VKTELRADVE LISSSTRGFA VSYGSLIGFL PYRNLAAKWK FLAFESWLRR KGVDPSPYRQ NLGVIGGQDV TSKSPSPDSS
501: LDSEVATTIN GEVSSDMKLE DLLMVYDREK QKFLSSFVGQ KIKVNVVMAN RNSRKLIFSM RPRENEEEVE KKRTLMAKLR VGDVVKCCIK KITYFGIFCE
601: LEGVPALVHQ SEVSWDATLD PASYFKIGQI VEAKVHQLDF ALERIFLSLK EITPDPLTEA LESVVGGDND QLGGRLQAAE LDAEWPDVES LIKELEMVEG
701: IQSVSKSRFF LSPGLAPTFQ VYMAPMFENQ YKLLARAGNR VQELIVEASL SKEEMKSTIM SCTNRVE
Arabidopsis Description
Nucleic acid-binding, OB-fold-like protein [Source:UniProtKB/TrEMBL;Acc:Q94AJ9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.