Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60261 | Canola | plastid | 50.06 | 53.45 |
| CDX98043 | Canola | plastid | 49.68 | 52.82 |
| KRH41145 | Soybean | nucleus, plastid | 49.16 | 52.63 |
| Bra019788.1-P | Field mustard | plastid | 49.42 | 52.33 |
| AT1G12800.1 | Thale cress | plastid | 50.97 | 51.37 |
| CDY31279 | Canola | cytosol | 11.38 | 49.16 |
| GSMUA_Achr1P17520_001 | Banana | nucleus, plastid | 45.67 | 49.1 |
| KRH59845 | Soybean | plastid | 46.31 | 48.91 |
| Solyc08g007950.2.1 | Tomato | plastid | 54.2 | 47.45 |
| KRH55977 | Soybean | cytosol, nucleus | 8.8 | 43.59 |
| TraesCS6A01G041000.1 | Wheat | nucleus, plastid | 37.9 | 38.86 |
| TraesCS6B01G056100.1 | Wheat | nucleus, plastid | 37.77 | 38.73 |
| TraesCS6D01G047400.1 | Wheat | nucleus, plastid | 37.65 | 38.59 |
| EES04357 | Sorghum | nucleus, plastid | 39.46 | 38.41 |
| Zm00001d014991_P004 | Maize | plastid | 38.16 | 37.29 |
| Os02t0115600-01 | Rice | plastid | 37.65 | 36.42 |
| HORVU6Hr1G008590.12 | Barley | nucleus | 34.41 | 34.82 |
| VIT_05s0062g00830.t01 | Wine grape | plastid | 12.42 | 24.62 |
Protein Annotations
| EntrezGene:100265091 | wikigene:100265091 | Gene3D:2.40.50.140 | MapMan:35.2 | EMBL:AM462939 | ProteinID:CAN68047 |
| ProteinID:CAN68047.1 | ProteinID:CCB58369 | ProteinID:CCB58369.1 | UniProt:F6HUE6 | EMBL:FN596251 | GO:GO:0000462 |
| GO:GO:0000466 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0019843 | GO:GO:0032040 | GO:GO:0034337 | GO:GO:1901259 | InterPro:IPR003029 | EntrezGene:LOC100265091 |
| wikigene:LOC100265091 | InterPro:NA-bd_OB-fold | PFAM:PF00575 | PFscan:PS50126 | PANTHER:PTHR23270 | PANTHER:PTHR23270:SF7 |
| InterPro:S1_dom | InterPro:S1_domain | SMART:SM00316 | SUPFAM:SSF50249 | UniParc:UPI0001982C8F | ArrayExpress:VIT_02s0025g03970 |
| EnsemblPlantsGene:VIT_02s0025g03970 | EnsemblPlants:VIT_02s0025g03970.t01 | unigene:Vvi.17968 | RefSeq:XP_002276931 | RefSeq:XP_002276931.1 | SEG:seg |
Description
No Description!
Coordinates
chr2:-:3488222..3495847
Molecular Weight (calculated)
86020.5 Da
IEP (calculated)
5.163
GRAVY (calculated)
-0.518
Length
773 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGLALTTSF SINRSHVATF SSRRIFFSRN PKLRVFASKD DPKLDKWDQM ELKFGRLLGE DPKLTLAKIM GRKSNPDVTP LEIEKKFHKK QGKLADAEVP
101: DIVFDGSEQG GSPNSLSGLN LVRPVPKKGI KFEGDDKLNE MKKQSQPAGK AVQNTKNTVP NVILRKPTVF NEDDVDSKPS RLRMKPNLSL KMKKEAKFSD
201: MTLLRKPEKL SADAENETKQ ESSDDARALA TDDTELKLQE EGTDDKINDV MLMRKPEPTI ISANLDEKLE HSGDAEAKIS IGIEEGSSSG SSEYTGAANS
301: MNNDIEESLE TRDDSFSMGP ELVDNSIIGL QPLEHSDIID MGPAKVETAA SEPSNRKSVD PKGKLSMEAA LQGKPKRLEQ SVKEMSNLSQ PETVLANPES
401: YGNSVELENF LATSSLKGHE DTDWSRAEDL VKTGGREEVE LISSSTRGFV VSFGSLIGFL PYRNLAAKWK FLAFESWLRR KGLDPSMYRQ NLGIVGSHEV
501: ANNPSPDANP GPEIHKQLEG EISPNMNLED LLRIYDQEKI KFLSSFVGQK INVNVVMADR KTRRLIFSGR PKEKEEMVEK KRSLMAKLSI GDIVKCRIKK
601: ITYFGIFVEV EGVPALVHQT EVSWDATLDP ASYFKIGQIV EAKVHQLDFS LERIFLSLKE ITPDPLIEAL EFVVGDNPLD GRLEAAQADT EWPDVESLIK
701: ELEQIEGIQS VSKGRFFLSP GLAPTFQVYM ASMFENQYKL LARSGNKVQE VIVEASLGKE DMKSAILTCT NRV
101: DIVFDGSEQG GSPNSLSGLN LVRPVPKKGI KFEGDDKLNE MKKQSQPAGK AVQNTKNTVP NVILRKPTVF NEDDVDSKPS RLRMKPNLSL KMKKEAKFSD
201: MTLLRKPEKL SADAENETKQ ESSDDARALA TDDTELKLQE EGTDDKINDV MLMRKPEPTI ISANLDEKLE HSGDAEAKIS IGIEEGSSSG SSEYTGAANS
301: MNNDIEESLE TRDDSFSMGP ELVDNSIIGL QPLEHSDIID MGPAKVETAA SEPSNRKSVD PKGKLSMEAA LQGKPKRLEQ SVKEMSNLSQ PETVLANPES
401: YGNSVELENF LATSSLKGHE DTDWSRAEDL VKTGGREEVE LISSSTRGFV VSFGSLIGFL PYRNLAAKWK FLAFESWLRR KGLDPSMYRQ NLGIVGSHEV
501: ANNPSPDANP GPEIHKQLEG EISPNMNLED LLRIYDQEKI KFLSSFVGQK INVNVVMADR KTRRLIFSGR PKEKEEMVEK KRSLMAKLSI GDIVKCRIKK
601: ITYFGIFVEV EGVPALVHQT EVSWDATLDP ASYFKIGQIV EAKVHQLDFS LERIFLSLKE ITPDPLIEAL EFVVGDNPLD GRLEAAQADT EWPDVESLIK
701: ELEQIEGIQS VSKGRFFLSP GLAPTFQVYM ASMFENQYKL LARSGNKVQE VIVEASLGKE DMKSAILTCT NRV
001: MDVLALSSSA SAAAPSASLA GKFLSFPSRV RVRRNRENLL AKQKKFLVSA SKREEPKLNE WDQMELNFGR LLGEDPKLTL AKIVARKVDP EASFIDIEKS
101: FYKNKGKIPE VEEIPLDWSK DNKKKSTSSL DGLKLVKPVL KDGVKFERPV MKKPSPVLKK PLVEAVAAPK VQRLPNVILR KPSSFYTSNG DDEESKLRLK
201: PNLTLKMRNE RENERFSDMT LLRKPEPVSV VAEEEDKPLS DDLTMEEGEQ EGGTYSQYTL LEKPEARLQP VNVEEEVGDS GGVESSEIVN NSIQKPEARP
301: ELENIEKEVA DSGVLESSEI ENNSIPTEMQ LNSEMSSEEK TINSDPLERI PSKPISQTIV EASLQGKPQR LDPSSAEPSV PNIGKPSVVN HEGRQVSVEL
401: KGPPTRSSLE ENDWNKAESL VKTELRADVE LISSSTRGFA VSYGSLIGFL PYRNLAAKWK FLAFESWLRR KGVDPSPYRQ NLGVIGGQDV TSKSPSPDSS
501: LDSEVATTIN GEVSSDMKLE DLLMVYDREK QKFLSSFVGQ KIKVNVVMAN RNSRKLIFSM RPRENEEEVE KKRTLMAKLR VGDVVKCCIK KITYFGIFCE
601: LEGVPALVHQ SEVSWDATLD PASYFKIGQI VEAKVHQLDF ALERIFLSLK EITPDPLTEA LESVVGGDND QLGGRLQAAE LDAEWPDVES LIKELEMVEG
701: IQSVSKSRFF LSPGLAPTFQ VYMAPMFENQ YKLLARAGNR VQELIVEASL SKEEMKSTIM SCTNRVE
101: FYKNKGKIPE VEEIPLDWSK DNKKKSTSSL DGLKLVKPVL KDGVKFERPV MKKPSPVLKK PLVEAVAAPK VQRLPNVILR KPSSFYTSNG DDEESKLRLK
201: PNLTLKMRNE RENERFSDMT LLRKPEPVSV VAEEEDKPLS DDLTMEEGEQ EGGTYSQYTL LEKPEARLQP VNVEEEVGDS GGVESSEIVN NSIQKPEARP
301: ELENIEKEVA DSGVLESSEI ENNSIPTEMQ LNSEMSSEEK TINSDPLERI PSKPISQTIV EASLQGKPQR LDPSSAEPSV PNIGKPSVVN HEGRQVSVEL
401: KGPPTRSSLE ENDWNKAESL VKTELRADVE LISSSTRGFA VSYGSLIGFL PYRNLAAKWK FLAFESWLRR KGVDPSPYRQ NLGVIGGQDV TSKSPSPDSS
501: LDSEVATTIN GEVSSDMKLE DLLMVYDREK QKFLSSFVGQ KIKVNVVMAN RNSRKLIFSM RPRENEEEVE KKRTLMAKLR VGDVVKCCIK KITYFGIFCE
601: LEGVPALVHQ SEVSWDATLD PASYFKIGQI VEAKVHQLDF ALERIFLSLK EITPDPLTEA LESVVGGDND QLGGRLQAAE LDAEWPDVES LIKELEMVEG
701: IQSVSKSRFF LSPGLAPTFQ VYMAPMFENQ YKLLARAGNR VQELIVEASL SKEEMKSTIM SCTNRVE
Arabidopsis Description
Nucleic acid-binding, OB-fold-like protein [Source:UniProtKB/TrEMBL;Acc:Q94AJ9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.