Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85123 | Canola | plastid | 81.89 | 85.83 |
| Bra014973.1-P | Field mustard | plastid | 83.42 | 85.6 |
| CDX77487 | Canola | plastid | 82.65 | 85.49 |
| GSMUA_Achr11P... | Banana | mitochondrion | 51.02 | 64.94 |
| VIT_05s0062g00830.t01 | Wine grape | plastid | 58.93 | 59.23 |
| PGSC0003DMT400042869 | Potato | plastid | 57.65 | 58.7 |
| Solyc09g097910.2.1 | Tomato | nucleus | 57.91 | 58.21 |
| KRG97374 | Soybean | nucleus | 56.12 | 58.2 |
| KRH31544 | Soybean | plastid | 56.38 | 57.25 |
| EER90528 | Sorghum | plastid | 46.94 | 50.27 |
| Zm00001d034828_P002 | Maize | plastid | 45.92 | 48.0 |
| TraesCS4A01G340600.1 | Wheat | plastid | 45.15 | 47.84 |
| TraesCS5D01G532100.1 | Wheat | plastid | 45.15 | 47.84 |
| TraesCS5B01G534400.1 | Wheat | plastid | 44.9 | 40.93 |
| Os03t0844900-01 | Rice | plasma membrane | 34.69 | 40.12 |
| HORVU5Hr1G120650.5 | Barley | nucleus | 44.39 | 35.73 |
| AT1G12800.1 | Thale cress | plastid | 24.74 | 12.65 |
Protein Annotations
| Gene3D:2.40.50.140 | MapMan:35.1 | EntrezGene:821951 | UniProt:A0A178VJX8 | ProteinID:AEE76803.1 | ArrayExpress:AT3G23700 |
| EnsemblPlantsGene:AT3G23700 | RefSeq:AT3G23700 | TAIR:AT3G23700 | RefSeq:AT3G23700-TAIR-G | EnsemblPlants:AT3G23700.1 | TAIR:AT3G23700.1 |
| EMBL:AY049283 | EMBL:AY139796 | Unigene:At.6667 | ProteinID:BAB01847.1 | GO:GO:0000462 | GO:GO:0000466 |
| GO:GO:0000481 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009409 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0032040 | GO:GO:0032508 | GO:GO:0034337 | InterPro:IPR003029 | InterPro:NA-bd_OB-fold |
| RefSeq:NP_566737.1 | ProteinID:OAP06048.1 | PFAM:PF00575 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50126 | PANTHER:PTHR23270 | UniProt:Q9LK47 |
| InterPro:S1_dom | InterPro:S1_domain | SMART:SM00316 | SUPFAM:SSF50249 | UniParc:UPI00000A370F | SEG:seg |
Description
At3g23700/MYM9_3 [Source:UniProtKB/TrEMBL;Acc:Q9LK47]
Coordinates
chr3:-:8531374..8533834
Molecular Weight (calculated)
42752.4 Da
IEP (calculated)
5.300
GRAVY (calculated)
-0.270
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVFSGATTL GSVSFASHLF DQQSTFLSCP LRLLPSSSSS SSNRNSLVCI VKSFSSSATA DTDRNSDQSA SSSVLSASNS LLRDTSDEAS AAGPSDWKTA
101: KAYCKSGDTF EGEVQGFNGG GLLIRFHSLV GFLPYPQLSP SRSCKEPQKS IHEIAKTLVG SKLPVKVVQA DEENRKLILS EKLALWPKYS QNVNVGDVFN
201: GRVGSVEDYG AFIHLRFDDG LYHLTGLVHV SEVSWDYVQD VRDVLRDGDE VRVIVTNIDK EKSRITLSIK QLEDDPLLET LDKVILKDSS TGSPSLSSNN
301: GDTIEPLPGL ETILEELLKE DGIEAVKINR QGFEKRVVSQ DLQLWLSNTP PSDGKFVLLA RAGRQVQEIH LTTSLEQGGI KKALQHVLER VP
101: KAYCKSGDTF EGEVQGFNGG GLLIRFHSLV GFLPYPQLSP SRSCKEPQKS IHEIAKTLVG SKLPVKVVQA DEENRKLILS EKLALWPKYS QNVNVGDVFN
201: GRVGSVEDYG AFIHLRFDDG LYHLTGLVHV SEVSWDYVQD VRDVLRDGDE VRVIVTNIDK EKSRITLSIK QLEDDPLLET LDKVILKDSS TGSPSLSSNN
301: GDTIEPLPGL ETILEELLKE DGIEAVKINR QGFEKRVVSQ DLQLWLSNTP PSDGKFVLLA RAGRQVQEIH LTTSLEQGGI KKALQHVLER VP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.