CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97837
KRG99095
KRH31032
KRH45896
KRH70713

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G43700.1	KRG99095	AT1G26830.1	15772280
AT3G43700.1	KRH45896	AT1G26830.1	15772280
AT3G43700.1	KRH70713	AT1G26830.1	15772280
AT3G43700.1	KRG97837	AT2G39760.1	15618422
AT3G43700.1	KRH31032	AT2G39760.1	15618422
AT5G21010.1	KRG97837	AT2G39760.1	15618422
AT5G21010.1	KRH31032	AT2G39760.1	15618422

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73429	Soybean	cytosol, plastid	93.43	93.43
KXG25976	Sorghum	cytosol	25.51	83.47
GSMUA_Achr4P14800_001	Banana	cytosol	70.71	71.25
GSMUA_Achr5P08970_001	Banana	cytosol	71.97	70.9
GSMUA_Achr7P27230_001	Banana	cytosol	69.95	70.48
VIT_06s0009g01030.t01	Wine grape	cytosol	75.0	70.21
PGSC0003DMT400058456	Potato	cytosol	71.46	69.88
Solyc01g009060.2.1	Tomato	cytosol	70.96	69.38
PGSC0003DMT400070468	Potato	cytosol	71.21	69.12
Solyc11g072070.1.1	Tomato	cytosol	70.96	68.87
HORVU5Hr1G104190.1	Barley	cytosol	69.19	67.82
TraesCS2A01G237800.1	Wheat	cytosol	72.73	67.61
Os07t0167200-01	Rice	cytosol	72.22	67.45
TraesCS2D01G246900.1	Wheat	cytosol, plastid	72.47	67.37
TraesCS2B01G262200.1	Wheat	cytosol	72.47	67.37
Zm00001d013094_P001	Maize	cytosol	70.96	65.65
CDX88828	Canola	plastid	67.93	65.61
Bra006591.1-P	Field mustard	plastid	67.93	65.61
Zm00001d034400_P003	Maize	cytosol	70.71	65.42
EER90755	Sorghum	cytosol	70.71	65.27
AT5G21010.1	Thale cress	cytosol	67.42	65.12
CDX70957	Canola	plastid	67.42	65.12
Zm00001d018887_P002	Maize	cytosol	69.19	63.43
KRG94896	Soybean	mitochondrion	69.19	63.43
TraesCS5A01G429400.2	Wheat	cytosol	69.95	63.39
CDY09093	Canola	cytosol, plastid	58.59	63.22
KXG34465	Sorghum	cytosol	70.2	63.04
HORVU2Hr1G055140.1	Barley	cytosol	72.98	62.96
KRH06640	Soybean	mitochondrion, plastid	68.94	62.9
Bra020142.1-P	Field mustard	plastid	65.91	62.89
TraesCS5B01G431400.2	Wheat	cytosol	69.19	62.7
KRG94057	Soybean	mitochondrion	28.54	61.75
AT3G43700.1	Thale cress	plastid	63.89	60.96
KRG88614	Soybean	mitochondrion	46.97	59.62
TraesCS5D01G437400.1	Wheat	cytosol	69.19	59.44
KRG88616	Soybean	cytosol	34.85	58.97
CDY71585	Canola	cytosol	30.05	58.91
KRG94056	Soybean	cytosol	11.62	58.23
KRG94050	Soybean	mitochondrion	55.3	57.94
KRG88615	Soybean	mitochondrion	55.05	57.67
KRG94069	Soybean	cytosol	51.77	57.42
KRG94064	Soybean	mitochondrion	54.8	57.41
KRH06645	Soybean	cytosol	56.31	56.31
KRG94047	Soybean	cytosol, mitochondrion, plastid	41.16	56.01
KRG95474	Soybean	plastid	57.32	55.37
KRH67156	Soybean	plastid	57.07	55.12
KRH71465	Soybean	plastid	56.82	54.61
CDY16586	Canola	cytosol	23.99	54.6
KRH31976	Soybean	plastid	56.31	54.0
KRG94053	Soybean	cytosol	25.25	53.48
KRG94052	Soybean	cytosol	25.25	53.48
KRH31032	Soybean	nucleus	55.81	53.25
KRG94058	Soybean	mitochondrion	50.25	52.93
KRG97837	Soybean	cytosol	55.05	52.66
KRH06646	Soybean	cytosol	34.6	44.92

Protein Annotations

Gene3D:1.25.40.420	EntrezGene:100790974	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EMBL:ACUP02008518
InterPro:BPM_C	InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_14G045500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
UniProt:I1M7E3	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	EnsemblPlants:KRH14738	ProteinID:KRH14738
ProteinID:KRH14738.1	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411
PANTHER:PTHR24411:SF53	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	UniParc:UPI000233ACD5	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:3470040..3474839

Molecular Weight (calculated)

43381.6 Da

IEP (calculated)

6.561

GRAVY (calculated)

-0.180

Length

396 amino acids

Sequence
(BLAST)

001: MSGAALSPPT NSKSLTQTVS GSHKFVIEGY SLAKGMGVGK HIASDVFTVG GYHWAIYFYP DGKNPEDNSA YVSVFIALAS EGTDVRALFE LTLLDQSGQG
101: KHKVHSHFDR SLETGPYTLK YKGSMWGYKR FFRRSLLETS DFLKNDCLKI NCTVGVVVSA SDCPQHYSIN IPESDIGSHF GALLDNMEGS DIIFDVAGEK
201: FHAHKLMLAA RSPEFRSKFL DGLDEEKNEI IVTDLEPKVF KAMLHFIYKD TLTEEVATVS STTTSHFPVS ETLTAKLLAA ADKYGLGRLR LICESCLCKD
301: ICVNSVADIL TLADHCHATE LKAVCLKFAA QNLAAVMRSD GFEHMKEKGP WLQSEILKTI AGGEGEGSSA VEKSQSVWGQ LSDGGDTNGR RVRQRI

Best Arabidopsis Sequence Match ( AT5G21010.1 )
(BLAST)

001: MSESVIQGSN PDRVLSPTSS KSVTQTVNGS HQFVIQGYSL AKGMGIGKHI ASDNFSVGGY QWGIFFYPDG KNPEDNSSYV SVFIALASEG TEVRALFELA
101: LVDQSGKGKH KVHSHFERSL DGGPYTLKYR GSMWGYKRFF RRSILETSDY LKDDCLIINC TVGVVVSEIL CPQLHSVHVP DSELGSHFGV LLDSMEGSDI
201: TFNIAGEKFL AHKLVLAARS PFFKSKFFSE FEANNTEVTI NDLEPKVFKA LLQFMYKDSL PEDVEPATAH TFERLKLSEI YETLIVKVLA AADKYDLIRL
301: RLLCESHICK GVSVKSVAKI LALADRYNAK ELKGVCLKFT AENLAAVLET DAYQQMKDEC VTLQSELLKA VAGHEEGSNS TGGAKSQSVW AQLSDGGGDT
401: TSRHVRQRTT

Arabidopsis Description

BPM5BTB/POZ and MATH domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q1EBV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.