Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Zm00001d007888_P002 | |
Zm00001d018043_P001 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G43700.1 | Zm00001d018043_P001 | AT1G26830.1 | 15772280 |
AT3G43700.1 | Zm00001d007888_P002 | AT2G39760.1 | 15618422 |
AT5G21010.1 | Zm00001d007888_P002 | AT2G39760.1 | 15618422 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG25976 | Sorghum | cytosol | 27.08 | 96.69 |
KXG34465 | Sorghum | cytosol | 94.21 | 92.29 |
TraesCS2B01G262200.1 | Wheat | cytosol | 84.26 | 85.45 |
TraesCS2D01G246900.1 | Wheat | cytosol, plastid | 84.26 | 85.45 |
Os07t0167200-01 | Rice | cytosol | 83.8 | 85.38 |
TraesCS2A01G237800.1 | Wheat | cytosol | 84.03 | 85.21 |
HORVU2Hr1G055140.1 | Barley | cytosol | 84.03 | 79.08 |
Zm00001d034400_P003 | Maize | cytosol | 78.24 | 78.97 |
Zm00001d013094_P001 | Maize | cytosol | 78.01 | 78.74 |
GSMUA_Achr7P27230_001 | Banana | cytosol | 68.52 | 75.32 |
GSMUA_Achr5P08970_001 | Banana | cytosol | 69.44 | 74.63 |
GSMUA_Achr4P14800_001 | Banana | cytosol | 67.82 | 74.55 |
PGSC0003DMT400058456 | Potato | cytosol | 68.52 | 73.09 |
Solyc01g009060.2.1 | Tomato | cytosol | 68.29 | 72.84 |
PGSC0003DMT400070468 | Potato | cytosol | 67.36 | 71.32 |
VIT_06s0009g01030.t01 | Wine grape | cytosol | 69.68 | 71.16 |
Solyc11g072070.1.1 | Tomato | cytosol | 66.9 | 70.83 |
KRH73429 | Soybean | cytosol, plastid | 64.35 | 70.2 |
KRH14738 | Soybean | cytosol | 63.43 | 69.19 |
VIT_08s0056g01670.t01 | Wine grape | plastid | 67.36 | 67.52 |
KRG94896 | Soybean | mitochondrion | 65.51 | 65.51 |
KRH06640 | Soybean | mitochondrion, plastid | 65.51 | 65.21 |
AT5G21010.1 | Thale cress | cytosol | 61.11 | 64.39 |
CDX88828 | Canola | plastid | 60.65 | 63.9 |
Bra006591.1-P | Field mustard | plastid | 60.65 | 63.9 |
CDX70957 | Canola | plastid | 60.42 | 63.66 |
Bra036437.1-P | Field mustard | plastid | 64.35 | 62.33 |
KRG94056 | Soybean | cytosol | 11.34 | 62.03 |
CDY29955 | Canola | plastid | 64.12 | 61.69 |
AT3G43700.1 | Thale cress | plastid | 59.03 | 61.45 |
KRG88614 | Soybean | mitochondrion | 44.21 | 61.22 |
Bra020142.1-P | Field mustard | plastid | 58.56 | 60.96 |
KRG94057 | Soybean | mitochondrion | 25.69 | 60.66 |
CDY09093 | Canola | cytosol, plastid | 51.39 | 60.49 |
KRG94050 | Soybean | mitochondrion | 52.31 | 59.79 |
KRG88615 | Soybean | mitochondrion | 52.08 | 59.52 |
AT3G03740.1 | Thale cress | cytosol | 63.89 | 59.35 |
KRG94047 | Soybean | cytosol, mitochondrion, plastid | 39.81 | 59.11 |
KRG94064 | Soybean | mitochondrion | 51.62 | 58.99 |
KRG88616 | Soybean | cytosol | 31.94 | 58.97 |
KRG94069 | Soybean | cytosol | 48.61 | 58.82 |
KRH06645 | Soybean | cytosol | 52.78 | 57.58 |
KRG94052 | Soybean | cytosol | 24.54 | 56.68 |
KRG94053 | Soybean | cytosol | 24.54 | 56.68 |
CDY71585 | Canola | cytosol | 25.69 | 54.95 |
KRG94058 | Soybean | mitochondrion | 47.45 | 54.52 |
Zm00001d022366_P001 | Maize | plastid | 51.85 | 53.08 |
CDY16586 | Canola | cytosol | 21.3 | 52.87 |
Zm00001d007068_P001 | Maize | plastid | 51.62 | 52.35 |
CDY67137 | Canola | endoplasmic reticulum | 43.06 | 52.25 |
KRH06646 | Soybean | cytosol | 33.8 | 47.87 |
Zm00001d007888_P002 | Maize | plastid | 46.3 | 46.51 |
Zm00001d024349_P001 | Maize | cytosol | 27.31 | 32.87 |
Protein Annotations
Gene3D:1.25.40.420 | EntrezGene:100284563 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | UniProt:B6TV51 |
InterPro:BPM_C | InterPro:BTB/POZ_dom | EMBL:EU968866 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | ProteinID:ONM51554.1 | PFAM:PF00651 |
PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF52 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00061 |
SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | UniParc:UPI000182DAC6 | EnsemblPlantsGene:Zm00001d018887 |
EnsemblPlants:Zm00001d018887_P002 | EnsemblPlants:Zm00001d018887_T002 | SEG:seg | : | : | : |
Description
math-btb19Speckle-type POZ protein
Coordinates
chr7:-:8354418..8360116
Molecular Weight (calculated)
47058.2 Da
IEP (calculated)
5.404
GRAVY (calculated)
-0.264
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEDAGGASP PPVPLAHVPP LQQPTTAAPS HRDMAASPTS SRSVTETVNG SHRFVIQGYS LAKGMGVGKH IASETFSVGG YQWAVYFYPD GKNPEDNSVY
101: VSVFIALASD GTDVRALFEL TLLDQSGKGK HKVHSHFDRS MESGPYTLKY RGSMWGYKRF FRRTALELSD YLKDDCLKIN CTVGVVVSTI DYSIPHSIHV
201: PDSDIGYDFG SLLDSQEGAD VILNVGGERF HAHKLVLAAR SHVFGSQFFD DESDGEKSEV NETDELKEFS IDDMEPNVFK AMLHFIYRDT LVDDDELGAS
301: SSDGSIFDTP AAKLLAAADK YHLARLKSLC ESYLCKGISV ASVASTLALA DRHHAMELKA VCLKFAAENL SAVMRSEGFI YLKDNCPSLQ SEILKTVAGC
401: EDQCSSVGKS QSVCGQLSDG GDSSCRRVRQ RT
101: VSVFIALASD GTDVRALFEL TLLDQSGKGK HKVHSHFDRS MESGPYTLKY RGSMWGYKRF FRRTALELSD YLKDDCLKIN CTVGVVVSTI DYSIPHSIHV
201: PDSDIGYDFG SLLDSQEGAD VILNVGGERF HAHKLVLAAR SHVFGSQFFD DESDGEKSEV NETDELKEFS IDDMEPNVFK AMLHFIYRDT LVDDDELGAS
301: SSDGSIFDTP AAKLLAAADK YHLARLKSLC ESYLCKGISV ASVASTLALA DRHHAMELKA VCLKFAAENL SAVMRSEGFI YLKDNCPSLQ SEILKTVAGC
401: EDQCSSVGKS QSVCGQLSDG GDSSCRRVRQ RT
001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
Arabidopsis Description
BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.