Factsheet for Zm00001d024349_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80118	Sorghum	cytosol	25.91	76.23
Os08t0227400-00	Rice	cytosol	26.18	41.23
TraesCS2B01G074000.1	Wheat	cytosol	37.88	39.77
HORVU6Hr1G034020.1	Barley	plastid	28.13	39.45
TraesCS5B01G472100.1	Wheat	cytosol	38.44	39.09
TraesCS3B01G507600.1	Wheat	cytosol	31.75	38.91
TraesCS7B01G049700.1	Wheat	cytosol	38.44	38.76
TraesCS5B01G472700.1	Wheat	cytosol	37.88	38.53
Os08t0227200-02	Rice	cytosol	37.6	38.03
TraesCS5B01G460300.1	Wheat	cytosol	38.44	38.02
TraesCS5B01G460600.1	Wheat	cytosol	37.6	37.71
TraesCS5B01G472400.1	Wheat	cytosol	28.97	37.55
TraesCS5B01G472600.1	Wheat	cytosol	37.05	37.25
TraesCS5D01G474700.1	Wheat	cytosol	23.96	36.91
TraesCS5B01G472500.1	Wheat	cytosol	36.21	36.83
TraesCS6D01G156500.1	Wheat	plastid	34.26	36.83
TraesCS5B01G460400.1	Wheat	cytosol	37.05	36.64
TraesCS6A01G167500.1	Wheat	plastid	33.98	36.53
Os08t0227100-01	Rice	cytosol	36.21	33.68
Zm00001d022366_P001	Maize	plastid	34.26	29.15
Zm00001d007068_P001	Maize	plastid	34.26	28.87
Zm00001d007888_P002	Maize	plastid	33.15	27.67
Zm00001d013094_P001	Maize	cytosol	32.87	27.57
Zm00001d018887_P002	Maize	cytosol	32.87	27.31
Zm00001d034400_P003	Maize	cytosol	32.31	27.1
Os08t0227500-00	Rice	nucleus, plastid	4.74	23.94

Protein Annotations

Gene3D:1.25.40.420	EntrezGene:103642490	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	ProteinID:AIB05892.1
ProteinID:AQK41065.1	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	UniProt:K7TZU9	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097
PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF212	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000221B65E	EnsemblPlantsGene:Zm00001d024349	EnsemblPlants:Zm00001d024349_P001	EnsemblPlants:Zm00001d024349_T001
SEG:seg	:	:	:	:	:

Description

math-btb27BTB/POZ and MATH domain-containing protein 2

Coordinates

chr10:-:66046841..66047920

Molecular Weight (calculated)

39033.7 Da

IEP (calculated)

6.781

GRAVY (calculated)

-0.042

Length

359 amino acids

Sequence
(BLAST)

001: MPLTVWADPI AGDARQQGAH MLEVIRYSTL HRRRGVGTGG RRCVESVGFT VGGYQWAILF YPDGDDAPGS SGYVSVSLAL LTRPARVRAS FNLGLVNRAT
101: GLPSFQPKDT TAVFDNAACC CRMYPIPTCR HERKRSCHGM PRLVKRCDLE AYLRDDAVTV ACVVTAVTGT ALTSRGAPEI RVPGGNLHLH IGELLVSKEG
201: ADVTFGVDGE AFAAHRIILA ARSPVFEAEL YSSTCTAETT DARTVVVGDM RPDTFRALLH FIYTDSLPAM SHMGMDETRE LVQHLLAAAD RYAIDRLKAM
301: CEHILARTLH VDNAASTLVL ADRHGCDTLK HASIYFIASS DNSEMGHDDV SVEALEKTV

Best Arabidopsis Sequence Match ( AT3G03740.1 )
(BLAST)

001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED

Arabidopsis Description

BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.