Factsheet for Zm00001d034400_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007888_P002
Zm00001d018043_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G43700.1	Zm00001d018043_P001	AT1G26830.1	15772280
AT3G43700.1	Zm00001d007888_P002	AT2G39760.1	15618422
AT5G21010.1	Zm00001d007888_P002	AT2G39760.1	15618422

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013094_P001	Maize	cytosol	93.93	93.93
HORVU5Hr1G104190.1	Barley	cytosol	82.01	86.88
TraesCS5A01G429400.2	Wheat	cytosol	85.28	83.52
TraesCS5B01G431400.2	Wheat	cytosol	84.58	82.84
Zm00001d018887_P002	Maize	cytosol	78.97	78.24
TraesCS5D01G437400.1	Wheat	cytosol	83.64	77.66
GSMUA_Achr7P27230_001	Banana	cytosol	69.16	75.32
GSMUA_Achr5P08970_001	Banana	cytosol	70.09	74.63
GSMUA_Achr4P14800_001	Banana	cytosol	68.22	74.3
Solyc01g009060.2.1	Tomato	cytosol	69.16	73.09
PGSC0003DMT400058456	Potato	cytosol	68.69	72.59
VIT_06s0009g01030.t01	Wine grape	cytosol	71.03	71.87
KRH73429	Soybean	cytosol, plastid	65.89	71.21
PGSC0003DMT400070468	Potato	cytosol	67.76	71.08
KRH14738	Soybean	cytosol	65.42	70.71
Solyc11g072070.1.1	Tomato	cytosol	67.06	70.34
VIT_08s0056g01670.t01	Wine grape	plastid	68.22	67.75
Bra006591.1-P	Field mustard	plastid	64.02	66.83
CDX88828	Canola	plastid	64.02	66.83
CDX70957	Canola	plastid	63.55	66.34
AT5G21010.1	Thale cress	cytosol	63.08	65.85
KRG94896	Soybean	mitochondrion	66.12	65.51
KRH06640	Soybean	mitochondrion, plastid	65.89	64.98
AT3G43700.1	Thale cress	plastid	62.62	64.58
Bra036437.1-P	Field mustard	plastid	65.89	63.23
Bra020142.1-P	Field mustard	plastid	60.75	62.65
CDY29955	Canola	plastid	65.42	62.36
CDY09093	Canola	cytosol, plastid	53.27	62.13
KRG88614	Soybean	mitochondrion	44.86	61.54
KRG94057	Soybean	mitochondrion	26.17	61.2
KRG88616	Soybean	cytosol	33.41	61.11
AT3G03740.1	Thale cress	cytosol	66.12	60.86
KRG94056	Soybean	cytosol	11.21	60.76
KRG94050	Soybean	mitochondrion	52.57	59.52
KRG88615	Soybean	mitochondrion	52.34	59.26
KRG94069	Soybean	cytosol	49.07	58.82
KRG94064	Soybean	mitochondrion	51.64	58.47
KRG94047	Soybean	cytosol, mitochondrion, plastid	39.72	58.42
CDY71585	Canola	cytosol	27.57	58.42
CDY16586	Canola	cytosol	23.36	57.47
KRH06645	Soybean	cytosol	53.04	57.32
KRG94052	Soybean	cytosol	24.3	55.62
KRG94053	Soybean	cytosol	24.3	55.62
KRG94058	Soybean	mitochondrion	48.36	55.05
Zm00001d022366_P001	Maize	plastid	52.57	53.32
Zm00001d007068_P001	Maize	plastid	52.57	52.82
CDY67137	Canola	endoplasmic reticulum	43.22	51.97
KRH06646	Soybean	cytosol	33.88	47.54
Zm00001d007888_P002	Maize	plastid	46.26	46.05
Zm00001d024349_P001	Maize	cytosol	27.1	32.31

Protein Annotations

Gene3D:1.25.40.420	EntrezGene:100273191	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1D6L7A4
InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	ProteinID:ONM10140.1	PFAM:PF00651	PFscan:PS50097
PFscan:PS50144	PANTHER:PTHR24411	PANTHER:PTHR24411:SF52	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI00022164AC	EnsemblPlantsGene:Zm00001d034400	EnsemblPlants:Zm00001d034400_P003
EnsemblPlants:Zm00001d034400_T003	SEG:seg	:	:	:	:

Description

math-btb18BTB/POZ and MATH domain-containing protein 4

Coordinates

chr1:-:291832067..291835875

Molecular Weight (calculated)

47119.2 Da

IEP (calculated)

5.201

GRAVY (calculated)

-0.298

Length

428 amino acids

Sequence
(BLAST)

001: MEDEDAGLGD GGEASPPHHA AASGDRARDL AASPTSSRSV TQTVNGSHRF VIQGYSLAKG MGVGKHIASD TFTVGGYQWA IYFYPDGKNP EDNSGYVSVF
101: IALASDGTDV RALFELTLLD QSGKGKHKVH SHFDRSLESG PYTLKYRGSM WGYKRFFRRN ALEQSDFLKD DCLKINCTVG VVVSTMDYSR PHSIEVPESD
201: IGYHFGTLLD TLEGVDVIFS VAGEKFHAHK LVLAARSSFF RSEFFDHESD EEKNETGTGD EIKEIVIDDM DPVVFKAVLH FMYRDNLVND DELMASSSDC
301: SIFDSLAGKL MAAADKYELP RLRLLCESYL CKHVSVNSVA TTLALADRYH AIELKSVCLK FAAENLSAVI RTEGFDYLKD NCPSLQSEIL RTVAGCEEQC
401: SSGVKSQSVW AQLSDGGDTS GRRVRPRV

Best Arabidopsis Sequence Match ( AT3G03740.1 )
(BLAST)

001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED

Arabidopsis Description

BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.