Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG25976 | Sorghum | cytosol | 27.61 | 91.74 |
| GSMUA_Achr7P27230_001 | Banana | cytosol | 78.86 | 80.66 |
| GSMUA_Achr4P14800_001 | Banana | cytosol | 76.87 | 78.63 |
| PGSC0003DMT400058456 | Potato | cytosol | 73.63 | 73.09 |
| Solyc01g009060.2.1 | Tomato | cytosol | 73.38 | 72.84 |
| Os07t0167200-01 | Rice | cytosol | 76.62 | 72.64 |
| HORVU5Hr1G104190.1 | Barley | cytosol | 72.89 | 72.52 |
| KRH73429 | Soybean | cytosol, plastid | 71.14 | 72.22 |
| VIT_06s0009g01030.t01 | Wine grape | cytosol | 75.87 | 72.1 |
| KRH14738 | Soybean | cytosol | 70.9 | 71.97 |
| PGSC0003DMT400070468 | Potato | cytosol | 72.89 | 71.81 |
| TraesCS2D01G246900.1 | Wheat | cytosol, plastid | 75.87 | 71.6 |
| TraesCS2A01G237800.1 | Wheat | cytosol | 75.87 | 71.6 |
| TraesCS2B01G262200.1 | Wheat | cytosol | 75.62 | 71.36 |
| Solyc11g072070.1.1 | Tomato | cytosol | 72.39 | 71.32 |
| Zm00001d034400_P003 | Maize | cytosol | 74.63 | 70.09 |
| VIT_08s0056g01670.t01 | Wine grape | plastid | 74.63 | 69.61 |
| EER90755 | Sorghum | cytosol | 74.13 | 69.46 |
| Zm00001d018887_P002 | Maize | cytosol | 74.63 | 69.44 |
| Zm00001d013094_P001 | Maize | cytosol | 73.88 | 69.39 |
| KXG34465 | Sorghum | cytosol | 75.87 | 69.16 |
| TraesCS5A01G429400.2 | Wheat | cytosol | 73.38 | 67.51 |
| KRG94896 | Soybean | mitochondrion | 71.89 | 66.9 |
| HORVU2Hr1G055140.1 | Barley | cytosol | 76.37 | 66.88 |
| TraesCS5B01G431400.2 | Wheat | cytosol | 72.64 | 66.82 |
| KRH06640 | Soybean | mitochondrion, plastid | 71.64 | 66.36 |
| KRG94056 | Soybean | cytosol | 12.69 | 64.56 |
| CDX88828 | Canola | plastid | 65.17 | 63.9 |
| CDX70957 | Canola | plastid | 65.17 | 63.9 |
| Bra006591.1-P | Field mustard | plastid | 65.17 | 63.9 |
| AT5G21010.1 | Thale cress | cytosol | 64.93 | 63.66 |
| AT3G43700.1 | Thale cress | plastid | 65.67 | 63.61 |
| Bra036437.1-P | Field mustard | plastid | 70.4 | 63.45 |
| TraesCS5D01G437400.1 | Wheat | cytosol | 72.64 | 63.34 |
| CDY29955 | Canola | plastid | 70.65 | 63.25 |
| KRG88614 | Soybean | mitochondrion | 48.51 | 62.5 |
| KRG88616 | Soybean | cytosol | 36.07 | 61.97 |
| CDY09093 | Canola | cytosol, plastid | 56.47 | 61.85 |
| Bra020142.1-P | Field mustard | plastid | 63.68 | 61.69 |
| KRG94050 | Soybean | mitochondrion | 57.96 | 61.64 |
| KRG94047 | Soybean | cytosol, mitochondrion, plastid | 44.53 | 61.51 |
| KRG94069 | Soybean | cytosol | 54.48 | 61.34 |
| KRG94057 | Soybean | mitochondrion | 27.86 | 61.2 |
| KRG88615 | Soybean | mitochondrion | 57.46 | 61.11 |
| AT3G03740.1 | Thale cress | cytosol | 70.65 | 61.08 |
| KRG94064 | Soybean | mitochondrion | 56.97 | 60.58 |
| KRH06645 | Soybean | cytosol | 57.96 | 58.84 |
| KRG94053 | Soybean | cytosol | 26.87 | 57.75 |
| KRG94052 | Soybean | cytosol | 26.87 | 57.75 |
| KRG94058 | Soybean | mitochondrion | 52.49 | 56.12 |
| GSMUA_Achr7P10650_001 | Banana | cytosol | 55.97 | 55.56 |
| GSMUA_Achr6P23740_001 | Banana | plastid | 57.46 | 55.53 |
| GSMUA_Achr6P16160_001 | Banana | plastid | 56.97 | 54.92 |
| CDY71585 | Canola | cytosol | 27.36 | 54.46 |
| CDY67137 | Canola | endoplasmic reticulum | 46.77 | 52.81 |
| CDY16586 | Canola | cytosol | 22.64 | 52.3 |
| GSMUA_Achr10P... | Banana | cytosol | 23.63 | 50.26 |
| KRH06646 | Soybean | cytosol | 36.32 | 47.87 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | InterPro:BPM_C | InterPro:BTB/POZ_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr5G08970_001 | EnsemblPlants:GSMUA_Achr5P08970_001 | EnsemblPlants:GSMUA_Achr5T08970_001 |
| InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 | UniProt:M0SWX6 | InterPro:MATH/TRAF_dom | PFAM:PF00651 |
| PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF52 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00061 |
| SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | UniParc:UPI000296B5AB | : |
Description
Putative Speckle-type POZ protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G08970_001]
Coordinates
chr5:+:6528533..6538687
Molecular Weight (calculated)
44012.0 Da
IEP (calculated)
6.152
GRAVY (calculated)
-0.196
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MPETAAVNPE KELALSPTSS RSVTETVNGS HKFVIQGYSL AKGMGVGKHI ASDTFTVGGF QWAIYFYPDG KNPEDNSAYV SVFIALASEG TDVRALFELT
101: LLDQSGKGKH KVHSHFDRSL ESGPYTLKYR GSMWGYKRFF RRAALETSDY LKDDCLKINC TVGVVVSVMD SPRLHSIQVP DSDIGMHFGA LLDNQEGSDV
201: IVHVSGEKFH AHKLVLAARS PVFRAQFFDD SDGQKSDIVV ADMEPRVFEA MLHFIYRDTF IEDDVLTTSS SPESFASDTL AAKLLAASDK YGLERLRLLC
301: EAHLCKDISV DSVACILSLA DCYHATELKA ACLKFSAENL GAVMRSSGFR HLKENCPSLQ SELLKIIAGA GDESSDGGKD RSVWAQLSDG GDSSGRRVRP
401: RL
101: LLDQSGKGKH KVHSHFDRSL ESGPYTLKYR GSMWGYKRFF RRAALETSDY LKDDCLKINC TVGVVVSVMD SPRLHSIQVP DSDIGMHFGA LLDNQEGSDV
201: IVHVSGEKFH AHKLVLAARS PVFRAQFFDD SDGQKSDIVV ADMEPRVFEA MLHFIYRDTF IEDDVLTTSS SPESFASDTL AAKLLAASDK YGLERLRLLC
301: EAHLCKDISV DSVACILSLA DCYHATELKA ACLKFSAENL GAVMRSSGFR HLKENCPSLQ SELLKIIAGA GDESSDGGKD RSVWAQLSDG GDSSGRRVRP
401: RL
001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
Arabidopsis Description
BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.