CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94057	Soybean	mitochondrion	47.34	97.27
KRG88616	Soybean	cytosol	58.24	93.59
KRG94050	Soybean	mitochondrion	91.76	91.27
KRG88615	Soybean	mitochondrion	90.96	90.48
KRG94064	Soybean	mitochondrion	89.63	89.15
KRG88614	Soybean	mitochondrion	73.67	88.78
KRG94069	Soybean	cytosol	83.51	87.96
KRG94047	Soybean	cytosol, mitochondrion, plastid	67.55	87.29
KRG94053	Soybean	cytosol	40.43	81.28
KRG94052	Soybean	cytosol	40.43	81.28
KXG25976	Sorghum	cytosol	21.28	66.12
KRG94056	Soybean	cytosol	12.5	59.49
KRG94896	Soybean	mitochondrion	67.29	58.56
KRH06640	Soybean	mitochondrion, plastid	67.02	58.06
KRH06645	Soybean	cytosol	60.9	57.83
GSMUA_Achr5P08970_001	Banana	cytosol	56.12	52.49
GSMUA_Achr7P27230_001	Banana	cytosol	54.79	52.42
KRH73429	Soybean	cytosol, plastid	54.26	51.52
GSMUA_Achr4P14800_001	Banana	cytosol	53.72	51.4
VIT_08s0056g01670.t01	Wine grape	plastid	58.78	51.28
Os07t0167200-01	Rice	cytosol	56.91	50.47
KRH14738	Soybean	cytosol	52.93	50.25
HORVU5Hr1G104190.1	Barley	cytosol	53.99	50.25
TraesCS2A01G237800.1	Wheat	cytosol	55.85	49.3
TraesCS2B01G262200.1	Wheat	cytosol	55.85	49.3
TraesCS2D01G246900.1	Wheat	cytosol, plastid	55.85	49.3
Zm00001d034400_P003	Maize	cytosol	55.05	48.36
Zm00001d013094_P001	Maize	cytosol	55.05	48.36
EER90755	Sorghum	cytosol	54.79	48.02
Zm00001d018887_P002	Maize	cytosol	54.52	47.45
KXG34465	Sorghum	cytosol	55.59	47.39
TraesCS5B01G431400.2	Wheat	cytosol	54.26	46.68
TraesCS5A01G429400.2	Wheat	cytosol	53.99	46.45
Bra036437.1-P	Field mustard	plastid	55.05	46.41
HORVU2Hr1G055140.1	Barley	cytosol	56.12	45.97
KRH06646	Soybean	cytosol	37.23	45.9
CDY29955	Canola	plastid	54.79	45.88
AT3G03740.1	Thale cress	cytosol	56.38	45.59
TraesCS5D01G437400.1	Wheat	cytosol	53.99	44.03
KRG95474	Soybean	plastid	47.87	43.9
KRH67156	Soybean	plastid	47.34	43.41
KRH71465	Soybean	plastid	46.54	42.48
KRH31976	Soybean	plastid	46.54	42.37
KRG97837	Soybean	cytosol	45.48	41.3
KRH31032	Soybean	nucleus	44.95	40.72
CDY67137	Canola	endoplasmic reticulum	35.9	37.92

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A0R0EUS4	EMBL:ACUP02011710
InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_19G058700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	EnsemblPlants:KRG94058	ProteinID:KRG94058	ProteinID:KRG94058.1	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411	PANTHER:PTHR24411:SF53	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0006ED903D	:

Description

hypothetical protein

Coordinates

chr19:-:11326439..11329715

Molecular Weight (calculated)

42265.1 Da

IEP (calculated)

6.342

GRAVY (calculated)

0.051

Length

376 amino acids

Sequence
(BLAST)

001: MSRAMCNPAM VSRSVLGSQT SSKSVTETMS GSHEFVIKGY SLTKGMGIGK YIVSETFIVG GFQWAIYFFP DGRDPKDNAA YVSVFVALHS KSTNVRALFD
101: LTLLDLCKKG EHKVHSHFSH SLTIGPYTLI NHGSMWGYTR FFKRRHLETS NFLKDDCLKI NCTIAVLVSS IDSSQLNTIQ VPESDIGEHF GMLLEDEESF
201: DVTFSVGGER FHAHKLVLAA RSTMFETQFF NAMKKDDQEI VVIDMEPKVF KHALLHFVYR DTLLEDEELF MLDSSFFPSL SESFIAKLLA AGEKYGLPRL
301: MLMCESILCK EISVDSVAYI FALADRYCAT HLKSICQKVS AENFDDLMSL VHGYIKAIVE ECNMSPIMGK DIVSVR

Best Arabidopsis Sequence Match ( AT3G03740.1 )
(BLAST)

001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED

Arabidopsis Description

BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.