CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67137	Canola	endoplasmic reticulum	73.27	92.42
AT3G03740.1	Thale cress	cytosol	91.31	88.17
KXG25976	Sorghum	cytosol	22.72	84.3
KRG94896	Soybean	mitochondrion	71.27	74.07
KRH06640	Soybean	mitochondrion, plastid	71.05	73.5
KRG94056	Soybean	cytosol	12.69	72.15
VIT_08s0056g01670.t01	Wine grape	plastid	67.93	70.77
GSMUA_Achr5P08970_001	Banana	cytosol	63.25	70.65
GSMUA_Achr7P27230_001	Banana	cytosol	61.69	70.48
GSMUA_Achr4P14800_001	Banana	cytosol	60.58	69.21
HORVU5Hr1G104190.1	Barley	cytosol	61.69	68.56
Os07t0167200-01	Rice	cytosol	62.81	66.51
TraesCS2B01G262200.1	Wheat	cytosol	62.58	65.96
TraesCS2D01G246900.1	Wheat	cytosol, plastid	62.58	65.96
TraesCS2A01G237800.1	Wheat	cytosol	62.36	65.73
Zm00001d013094_P001	Maize	cytosol	62.58	65.65
Zm00001d034400_P003	Maize	cytosol	62.36	65.42
EER90755	Sorghum	cytosol	62.36	65.27
CDX88828	Canola	plastid	58.57	64.15
CDX70957	Canola	plastid	58.57	64.15
Zm00001d018887_P002	Maize	cytosol	61.69	64.12
KXG34465	Sorghum	cytosol	62.58	63.72
KRH06645	Soybean	cytosol	56.12	63.64
TraesCS5A01G429400.2	Wheat	cytosol	61.69	63.39
TraesCS5B01G431400.2	Wheat	cytosol	61.47	63.16
HORVU2Hr1G055140.1	Barley	cytosol	63.47	62.09
KRG94052	Soybean	cytosol	25.84	62.03
KRG94053	Soybean	cytosol	25.84	62.03
KRG94047	Soybean	cytosol, mitochondrion, plastid	39.64	61.17
KRG94050	Soybean	mitochondrion	51.45	61.11
KRG88614	Soybean	mitochondrion	42.32	60.9
KRG88615	Soybean	mitochondrion	51.22	60.85
KRG94069	Soybean	cytosol	48.11	60.5
TraesCS5D01G437400.1	Wheat	cytosol	61.92	60.3
CDY09093	Canola	cytosol, plastid	49.22	60.22
KRG88616	Soybean	cytosol	31.18	59.83
KRG94064	Soybean	mitochondrion	50.33	59.79
KRG94057	Soybean	mitochondrion	24.05	59.02
CDY71585	Canola	cytosol	25.84	57.43
CDY58342	Canola	cytosol	50.78	56.58
CDY05245	Canola	cytosol	49.22	55.81
CDY08064	Canola	cytosol	50.56	55.77
CDY66705	Canola	cytosol	49.67	55.34
CDY24708	Canola	cytosol	49.44	55.09
KRG94058	Soybean	mitochondrion	45.88	54.79
CDY16586	Canola	cytosol	20.94	54.02
CDY07031	Canola	cytosol	47.66	53.63
CDX93238	Canola	cytosol	47.22	53.54
CDY07638	Canola	cytosol	47.22	53.0
KRH06646	Soybean	cytosol	35.41	52.13
CDY61778	Canola	cytosol	47.66	50.71
CDY18844	Canola	cytosol	48.33	50.58
CDX92567	Canola	cytosol	49.44	50.57
CDX70860	Canola	cytosol	49.44	50.45
CDY13941	Canola	cytosol	48.33	49.43
CDY02591	Canola	cytosol	42.76	48.0
CDX93236	Canola	cytosol	29.84	32.84

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A078GTW4	InterPro:BPM_C
InterPro:BTB/POZ_dom	EnsemblPlants:CDY29955	ProteinID:CDY29955	ProteinID:CDY29955.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00044471001	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411	PANTHER:PTHR24411:SF53	InterPro:SKP1/BTB/POZ_sf
SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0004EBCF6A
SEG:seg	:	:	:	:	:

Description

BnaC01g40530DBnaC01g40530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTW4]

Coordinates

chrLK032247:-:68593..72011

Molecular Weight (calculated)

48871.9 Da

IEP (calculated)

4.654

GRAVY (calculated)

-0.342

Length

449 amino acids

Sequence
(BLAST)

001: MPSPPTTTSL SVTQTINGSH SFTIKGYSLA KGIGIGKHIA SDTFTVGGYE WAIYFYPDGK NPEDNSAYVS VFIALASDGT DVRALFELSL LDQSGKGKHK
101: VHSHFDRALE SGPYTLKYRG SMWGYKRFFR RTLLEASDYL KDDCLKINCT VGVVVSEIDC PRLHSIHVPA SDIGSHFGML LENEDGSDIT FNVSGEKFRA
201: HRLVLAARSP VFESEFLDVI GEAEERDIEV TDMEPKVFKA LLHYIYKDAL IEDAETVSSS GSSVGPSASD TLAAKLLGAA DKYKLPRLSL MCESVLCKDI
301: SVDSVANILA LADRYNASAL KSVCLKFAAE NLIAVMRSDG FDYLREHCPS LQSELLKTVA GCEEELSGGG GGGGKTRSVW GQFSDGGADT NERSVRQQQQ
401: QHAWGEVNGA ERSQSVWVQV VNANASGRNN DDDNNNENGD DDDDPMAED

Best Arabidopsis Sequence Match ( AT3G03740.1 )
(BLAST)

001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED

Arabidopsis Description

BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.