CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER97813
EES05529

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G43700.1	EES05529	AT1G26830.1	15772280
AT3G43700.1	EER97813	AT2G39760.1	15618422
AT5G21010.1	EER97813	AT2G39760.1	15618422

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25976	Sorghum	cytosol	26.98	98.35
Zm00001d018887_P002	Maize	cytosol	92.29	94.21
TraesCS2D01G246900.1	Wheat	cytosol, plastid	85.49	88.5
TraesCS2A01G237800.1	Wheat	cytosol	85.03	88.03
TraesCS2B01G262200.1	Wheat	cytosol	84.81	87.79
Os07t0167200-01	Rice	cytosol	83.9	87.26
HORVU2Hr1G055140.1	Barley	cytosol	85.26	81.92
EER90755	Sorghum	cytosol	79.59	81.82
GSMUA_Achr5P08970_001	Banana	cytosol	69.16	75.87
GSMUA_Achr7P27230_001	Banana	cytosol	67.35	75.57
GSMUA_Achr4P14800_001	Banana	cytosol	66.21	74.3
PGSC0003DMT400058456	Potato	cytosol	67.8	73.83
Solyc01g009060.2.1	Tomato	cytosol	67.57	73.58
PGSC0003DMT400070468	Potato	cytosol	66.44	71.81
VIT_06s0009g01030.t01	Wine grape	cytosol	68.48	71.39
KRH73429	Soybean	cytosol, plastid	63.95	71.21
Solyc11g072070.1.1	Tomato	cytosol	65.53	70.83
KRH14738	Soybean	cytosol	63.04	70.2
VIT_08s0056g01670.t01	Wine grape	plastid	66.67	68.21
KRG94896	Soybean	mitochondrion	65.53	66.9
KRH06640	Soybean	mitochondrion, plastid	65.53	66.59
Bra006591.1-P	Field mustard	plastid	60.77	65.37
CDX88828	Canola	plastid	60.77	65.37
AT5G21010.1	Thale cress	cytosol	60.54	65.12
CDX70957	Canola	plastid	60.54	65.12
KRG94056	Soybean	cytosol	11.56	64.56
Bra036437.1-P	Field mustard	plastid	63.95	63.23
CDY29955	Canola	plastid	63.72	62.58
AT3G43700.1	Thale cress	plastid	58.73	62.41
Bra020142.1-P	Field mustard	plastid	58.73	62.41
KRG88614	Soybean	mitochondrion	43.76	61.86
KRG94057	Soybean	mitochondrion	25.62	61.75
CDY09093	Canola	cytosol, plastid	51.02	61.31
KRG94050	Soybean	mitochondrion	52.15	60.85
KRG88615	Soybean	mitochondrion	51.93	60.58
AT3G03740.1	Thale cress	cytosol	63.72	60.43
KRG94064	Soybean	mitochondrion	51.7	60.32
KRG94047	Soybean	cytosol, mitochondrion, plastid	39.68	60.14
KRG94069	Soybean	cytosol	48.53	59.94
KRG88616	Soybean	cytosol	31.75	59.83
KRH06645	Soybean	cytosol	53.06	59.09
KRG94052	Soybean	cytosol	24.49	57.75
KRG94053	Soybean	cytosol	24.49	57.75
CDY71585	Canola	cytosol	26.08	56.93
KRG94058	Soybean	mitochondrion	47.39	55.59
CDY16586	Canola	cytosol	21.54	54.6
EER97813	Sorghum	plastid	48.75	53.48
EER99824	Sorghum	plastid	51.47	53.29
CDY67137	Canola	endoplasmic reticulum	42.63	52.81
KRH06646	Soybean	cytosol	34.01	49.18
EES14728	Sorghum	cytosol	33.33	41.53
OQU80115	Sorghum	cytosol	31.52	39.71
KXG24742	Sorghum	mitochondrion	31.52	38.5
EES13596	Sorghum	mitochondrion	29.93	38.04
EES14736	Sorghum	cytosol	30.61	38.03
KXG24752	Sorghum	cytosol	14.06	37.58
EES14743	Sorghum	cytosol, mitochondrion, plastid	30.16	36.94
OQU82373	Sorghum	cytosol, plastid	28.12	36.58
KXG27151	Sorghum	plastid	31.97	36.53
EER99574	Sorghum	cytosol	29.93	36.16
OQU82372	Sorghum	plastid	27.89	36.07
OQU80150	Sorghum	plastid	28.34	35.82
KXG24756	Sorghum	cytosol	28.8	35.77
KXG24755	Sorghum	mitochondrion	30.39	35.64
EES08963	Sorghum	cytosol	30.61	35.53
EES14737	Sorghum	cytosol	28.57	35.49
KXG24747	Sorghum	cytosol	27.89	34.36
EES11459	Sorghum	plastid	29.25	33.86
EER87831	Sorghum	cytosol	26.98	33.62
OQU80118	Sorghum	cytosol	9.3	33.61
OQU80119	Sorghum	cytosol	28.8	33.51
EES13585	Sorghum	cytosol, plastid	27.89	31.87
KXG24406	Sorghum	cytosol	28.8	30.24
EES11455	Sorghum	cytosol	22.0	29.94
KXG24338	Sorghum	cytosol	24.49	22.78

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1B6Q961	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	EnsemblPlants:KXG34465	ProteinID:KXG34465	ProteinID:KXG34465.1	InterPro:MATH/TRAF_dom	ProteinID:OQU88497.1
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411	PANTHER:PTHR24411:SF52	InterPro:SKP1/BTB/POZ_sf
SMART:SM00061	SMART:SM00225	EnsemblPlantsGene:SORBI_3002G045400	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
UniParc:UPI0002207024	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:4283049..4293194

Molecular Weight (calculated)

47902.3 Da

IEP (calculated)

5.728

GRAVY (calculated)

-0.226

Length

441 amino acids

Sequence
(BLAST)

001: MDEDAGGASP PPVPLAQAPP PQHPIAVAAA ATATAAAPSQ RDMAASPTSS RSVTETVNGS HRFVIQGYSL AKGMGVGKHI ASETFTVGGY QWAVYFYPDG
101: KNPEDNSVYV SVFIALASDG TDVRALFELT LLDQSGKGKH KVHSHFDRSL ESGPYTLKYR GSMWGYKRFF RRTALEASDF LKDDCLKINC TVGVVVSTID
201: YSRPHSIHVP DSDIGYDFGS LLDSQEGVDV ILNVGGERFH AHKLVLAARS HVFRSQLFDD ESDGEKSEVN ETDELKEFSI DDMEPTVFKA MLHFIYRDTL
301: VDDNELGASS SDGSIFDTLA AKLLAAADKY HLPRLRLLCE SYLCKGISVA SVASTLALAD RHRAMELKAV CLKFSAENLS AVMRTDGFIY LKDNCPSLQS
401: EILKTVAGCE DQCSSVGKSQ SVCGQLSDGG DSSVRRVRQR T

Best Arabidopsis Sequence Match ( AT3G03740.1 )
(BLAST)

001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED

Arabidopsis Description

BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.