CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0227200-02	Rice	cytosol	50.4	53.8
EER99574	Sorghum	cytosol	50.66	52.6
Os08t0227100-01	Rice	cytosol	52.51	51.55
EER87831	Sorghum	cytosol	47.76	51.13
KXG24755	Sorghum	mitochondrion	50.13	50.53
EES14737	Sorghum	cytosol	46.44	49.58
KXG24747	Sorghum	cytosol	46.17	48.88
EES14736	Sorghum	cytosol	44.85	47.89
KXG24756	Sorghum	cytosol	44.33	47.32
EES14743	Sorghum	cytosol, mitochondrion, plastid	43.8	46.11
OQU80115	Sorghum	cytosol	42.48	46.0
EES13596	Sorghum	mitochondrion	41.95	45.82
KXG24752	Sorghum	cytosol	19.79	45.45
KXG24742	Sorghum	mitochondrion	42.74	44.88
EES14728	Sorghum	cytosol	41.42	44.35
OQU80150	Sorghum	plastid	40.37	43.84
OQU80118	Sorghum	cytosol	13.72	42.62
EES13585	Sorghum	cytosol, plastid	40.9	40.16
EES08963	Sorghum	cytosol	39.31	39.21
KXG27151	Sorghum	plastid	35.36	34.72
OQU82373	Sorghum	cytosol, plastid	30.87	34.51
KXG25976	Sorghum	cytosol	10.55	33.06
EER97813	Sorghum	plastid	34.83	32.84
EER99824	Sorghum	plastid	36.68	32.63
EES11455	Sorghum	cytosol	27.44	32.1
EES11459	Sorghum	plastid	31.66	31.5
OQU82372	Sorghum	plastid	27.7	30.79
EER90755	Sorghum	cytosol	34.04	30.07
KXG24406	Sorghum	cytosol	32.72	29.52
KXG34465	Sorghum	cytosol	33.51	28.8
KXG24338	Sorghum	cytosol	33.25	26.58

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8086068	UniProt:A0A1Z5R976
InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	EnsemblPlants:OQU80119	ProteinID:OQU80119	ProteinID:OQU80119.1
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF179	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	EnsemblPlantsGene:SORBI_3007G081800	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0001A87E59
RefSeq:XP_002445239.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:9717514..9718938

Molecular Weight (calculated)

41880.5 Da

IEP (calculated)

7.446

GRAVY (calculated)

-0.141

Length

379 amino acids

Sequence
(BLAST)

001: MTTQAKTAST CPPPETAQGT HVFDILGYSK HRGMGADYFI RSGVFNVAGH QWVIFFYPDG YGEELAGGFD FVSAYLRLLS TSGKVRASCD LRLVNPGTGV
101: STSVHPTLVI TRELDPEKDK VVCHCMCIGR GELEGTYVKN DRLTMECVVT VRKEPKVSKS RTFPSIRVPP SNLKRQLAEL LESREGADVT FAVAGETFAA
201: HRLVLAMRSP VFKAELCGPM REVGMGTRPV VVEDMQPDVF RAMLYFVYTD SMDHNEDLSR DYHSKNCDMV RHLLVAADRY AIERLKLICQ SILCNNLDVQ
301: NVATTLALAD QHHCDKLKHA CVEFMCCSNN AQDVVATQGY MDLAKTSPSV LADAMGRMSK ISKKVMTRAL QAQDGSSIS

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.