CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0227400-00	Rice	cytosol	38.27	60.09
EER87831	Sorghum	cytosol	56.42	57.06
EER99574	Sorghum	cytosol	50.0	49.04
EES14737	Sorghum	cytosol	47.77	48.17
KXG24756	Sorghum	cytosol	46.09	46.48
EES14736	Sorghum	cytosol	46.09	46.48
OQU80119	Sorghum	cytosol	48.88	46.17
KXG24742	Sorghum	mitochondrion	46.37	45.98
KXG24755	Sorghum	mitochondrion	48.04	45.74
KXG24752	Sorghum	cytosol	20.95	45.45
OQU80115	Sorghum	cytosol	44.13	45.14
EES14728	Sorghum	cytosol	43.02	43.5
OQU80150	Sorghum	plastid	41.34	42.41
EES14743	Sorghum	cytosol, mitochondrion, plastid	41.62	41.39
EES13596	Sorghum	mitochondrion	39.94	41.21
OQU80118	Sorghum	cytosol	13.13	38.52
EES08963	Sorghum	cytosol	38.83	36.58
EES13585	Sorghum	cytosol, plastid	39.39	36.53
KXG27151	Sorghum	plastid	37.15	34.46
EES11455	Sorghum	cytosol	29.05	32.1
OQU82373	Sorghum	cytosol, plastid	30.17	31.86
Os08t0227500-00	Rice	nucleus, plastid	6.15	30.99
OQU82372	Sorghum	plastid	29.05	30.5
EER97813	Sorghum	plastid	34.08	30.35
EER99824	Sorghum	plastid	35.47	29.81
EER90755	Sorghum	cytosol	34.36	28.67
EES11459	Sorghum	plastid	29.89	28.08
KXG34465	Sorghum	cytosol	34.36	27.89
KXG24406	Sorghum	cytosol	32.4	27.62
KXG25976	Sorghum	cytosol	8.94	26.45
KXG24338	Sorghum	cytosol	29.61	22.36

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1B6PGK7	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	EnsemblPlants:KXG24747	ProteinID:KXG24747	ProteinID:KXG24747.1	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF179	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
EnsemblPlantsGene:SORBI_3007G080900	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI00081AB6BA	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:9645515..9661494

Molecular Weight (calculated)

39228.8 Da

IEP (calculated)

5.212

GRAVY (calculated)

0.003

Length

358 amino acids

Sequence
(BLAST)

001: MPTSRTVSTI AAQTEQGTHV VRILGYSQLR RMKEVINSDK FSVGGHEWFV KLVLDSCSTA TAFSHPDCII AVLLLKSHAQ TKEVQASFDL NLLDLASGSS
101: LSVHKVAPSF FHPGYGDTTV ACCQIKNDLF ETSSYLQDDC LTIEFSITVF KGPLSSETKS LPRIHVPPSD IAADFGNLME TMEGADVTFS VGGQEFTAHR
201: IVLATRSPVF RAQLYGPIRE AGTGTAPIVI EDVQADAFRA LLRFVYTDSL PPSDDLQSDD YAEMIRHLLV AADRYAMERL KLMCQSILCK NLTVQDVPTT
301: LALADQHNCD LLRDACVEFI GCLSATDAVA ATQGYKDLKR TCPSIVTDFE EASKLRKT

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.