CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 2
plasma membrane 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G352200.1	Wheat	cytosol	44.44	54.24
EES13596	Sorghum	mitochondrion	51.67	53.6
OQU80150	Sorghum	plastid	51.94	53.58
KXG24752	Sorghum	cytosol	23.89	52.12
KXG24742	Sorghum	mitochondrion	49.17	49.03
OQU80115	Sorghum	cytosol	47.22	48.57
EER87831	Sorghum	cytosol	46.94	47.74
OQU80118	Sorghum	cytosol	16.11	47.54
EES13585	Sorghum	cytosol, plastid	50.83	47.41
EES14728	Sorghum	cytosol	45.56	46.33
EES08963	Sorghum	cytosol	48.61	46.05
OQU80119	Sorghum	cytosol	46.11	43.8
EES14736	Sorghum	cytosol	42.78	43.38
KXG24755	Sorghum	mitochondrion	45.0	43.09
EER99574	Sorghum	cytosol	43.06	42.47
EES14737	Sorghum	cytosol	41.67	42.25
KXG24756	Sorghum	cytosol	41.39	41.97
KXG24747	Sorghum	cytosol	41.39	41.62
OQU82372	Sorghum	plastid	35.28	37.24
OQU82373	Sorghum	cytosol, plastid	34.44	36.58
EES11459	Sorghum	plastid	38.06	35.96
EES11455	Sorghum	cytosol	32.22	35.8
KXG27151	Sorghum	plastid	38.33	35.75
KXG24406	Sorghum	cytosol	41.11	35.24
EER99824	Sorghum	plastid	40.56	34.27
EER97813	Sorghum	plastid	36.94	33.08
KXG25976	Sorghum	cytosol	11.11	33.06
EER90755	Sorghum	cytosol	37.78	31.7
KXG34465	Sorghum	cytosol	36.94	30.16
KXG24338	Sorghum	cytosol	34.72	26.37

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8086077	InterPro:BPM_C
InterPro:BTB/POZ_dom	UniProt:C5YJ19	EnsemblPlants:EES14743	ProteinID:EES14743	ProteinID:EES14743.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211	InterPro:SKP1/BTB/POZ_sf
SMART:SM00061	SMART:SM00225	EnsemblPlantsGene:SORBI_3007G083400	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
UniParc:UPI0001A87EC4	RefSeq:XP_002445248.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:10078501..10079583

Molecular Weight (calculated)

40139.0 Da

IEP (calculated)

6.249

GRAVY (calculated)

-0.252

Length

360 amino acids

Sequence
(BLAST)

001: MAASQGPRRK TVSRCIPETD QCTQVFDISG YSLLKGLGAG KFVESAAFVA GGRDWCIRFF PDGHAGEDLK DYVAVYLALV TNSAEARALF EFRLVNPATG
101: GSSSVYTCKT PMSFKAGGNQ GAWGCRKLKK RSELEESVYL QNDRLVIQCD VTVIVGPPVI TSEADIQVPP SDLTDTLGKY LESGKRSDVT FKVKGEAFHA
201: HKFVLAFRSP VFEAEFYGPM RGKSRRQNIT VEDMEPDVFK ALLHFIYTDS LPPLDDLDED ESQEMDKHLL VAADRYAMER MKLMCESILT KRIDVHSVAT
301: TLALADQHHC EKLKEACIGF ISSSDKMDLV ASNGYEHLKR ACPAIFMDIW ENEAKSRRMM

Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.