CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G307800.1	Wheat	cytosol	25.74	38.01
TraesCS7B01G211000.1	Wheat	cytosol	24.89	36.76
EES13596	Sorghum	mitochondrion	26.58	36.31
OQU80150	Sorghum	plastid	26.37	35.82
KXG24742	Sorghum	mitochondrion	27.22	35.73
KXG24755	Sorghum	mitochondrion	28.06	35.37
OQU80118	Sorghum	cytosol	9.07	35.25
EER99574	Sorghum	cytosol	27.0	35.07
EES08963	Sorghum	cytosol	27.85	34.74
EES14743	Sorghum	cytosol, mitochondrion, plastid	26.37	34.72
KXG24756	Sorghum	cytosol	25.74	34.37
EER87831	Sorghum	cytosol	25.53	34.18
EES14737	Sorghum	cytosol	25.53	34.08
OQU80115	Sorghum	cytosol	24.89	33.71
EES14728	Sorghum	cytosol	25.11	33.62
EES11455	Sorghum	cytosol	22.78	33.33
OQU80119	Sorghum	cytosol	26.58	33.25
EES14736	Sorghum	cytosol	24.68	32.96
EES13585	Sorghum	cytosol, plastid	26.37	32.38
KXG24752	Sorghum	cytosol	11.18	32.12
KXG25976	Sorghum	cytosol	8.02	31.41
OQU82373	Sorghum	cytosol, plastid	21.52	30.09
KXG24747	Sorghum	cytosol	22.36	29.61
KXG27151	Sorghum	plastid	24.05	29.53
EER97813	Sorghum	plastid	23.0	27.11
OQU82372	Sorghum	plastid	19.41	26.98
EES11459	Sorghum	plastid	21.52	26.77
EER99824	Sorghum	plastid	24.05	26.76
EER90755	Sorghum	cytosol	22.57	24.94
KXG34465	Sorghum	cytosol	22.78	24.49
KXG24406	Sorghum	cytosol	21.31	24.05

Protein Annotations

Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1B6PF91	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	EnsemblPlants:KXG24338
ProteinID:KXG24338	ProteinID:KXG24338.2	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144
PANTHER:PTHR44756	PANTHER:PTHR44756:SF1	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	EnsemblPlantsGene:SORBI_3007G027500	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000B8B9C86	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:+:2498878..2501009

Molecular Weight (calculated)

52497.4 Da

IEP (calculated)

6.014

GRAVY (calculated)

-0.339

Length

474 amino acids

Sequence
(BLAST)

001: MPHHLPVVVV PVEIAGEQQH VGVDEVKQSS KDHRLHVVDG DAIHGLLLHI PEELRHEHRR PRSQHHPVRA EDLSLDGERD VRRLVAMLLV QQQLAQVLGQ
101: VRRRQSEFAQ SYGLWHPRLV GDDVDDALDL IMNTNNTSAQ EVLGEKMALP ANTKSTNTTE TVRGEHRFDI DGYSGKLRAG RVVTSETFAV GGLDWAIRYH
201: PAAAEVGDEE YVSVFVKLVT PNARAWALYD LRLVDRATGL PRSVRRRREP VAFDASKARK RERGSRLFMT VSELAASPYL RDDRLTVECV LDVVETFLSE
301: TTASPGTAEP PPPDLSRHLG ALLLQTPVGA DVSFAVQGET FRAHRVVLAA RSPVLKAELS GSAPAKEDDD DDASEVVAVD GMAPPVFKTL LHFVYTDTLP
401: EDLLGDLGRE EQQEFVRDLL AGADRYGMDR LKKICELVLR KPLDAKTVAA ALDQHRHCQC QALGDGNVQF MPSA

Best Arabidopsis Sequence Match ( AT2G39760.2 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGGT GCI

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.