Factsheet for Bra036437.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67137	Canola	endoplasmic reticulum	75.11	94.1
AT3G03740.1	Thale cress	cytosol	91.7	87.96
KXG25976	Sorghum	cytosol	22.87	84.3
KRG94896	Soybean	mitochondrion	71.52	73.84
KRH06640	Soybean	mitochondrion, plastid	71.3	73.27
KRG94056	Soybean	cytosol	12.78	72.15
VIT_08s0056g01670.t01	Wine grape	plastid	68.61	71.0
GSMUA_Achr7P27230_001	Banana	cytosol	62.33	70.74
GSMUA_Achr5P08970_001	Banana	cytosol	63.45	70.4
HORVU5Hr1G104190.1	Barley	cytosol	62.56	69.06
GSMUA_Achr4P14800_001	Banana	cytosol	60.76	68.96
Os07t0167200-01	Rice	cytosol	63.45	66.75
TraesCS2B01G262200.1	Wheat	cytosol	63.23	66.2
TraesCS2D01G246900.1	Wheat	cytosol, plastid	63.23	66.2
Zm00001d013094_P001	Maize	cytosol	63.45	66.12
TraesCS2A01G237800.1	Wheat	cytosol	63.0	65.96
Zm00001d034400_P003	Maize	cytosol	63.23	65.89
EER90755	Sorghum	cytosol	63.23	65.73
Bra006591.1-P	Field mustard	plastid	59.42	64.63
Zm00001d018887_P002	Maize	cytosol	62.33	64.35
KXG34465	Sorghum	cytosol	63.23	63.95
TraesCS5A01G429400.2	Wheat	cytosol	62.56	63.84
KRH06645	Soybean	cytosol	56.5	63.64
TraesCS5B01G431400.2	Wheat	cytosol	62.33	63.62
KRG94053	Soybean	cytosol	26.23	62.57
KRG94052	Soybean	cytosol	26.23	62.57
HORVU2Hr1G055140.1	Barley	cytosol	64.13	62.31
KRG94047	Soybean	cytosol, mitochondrion, plastid	40.13	61.51
KRG94050	Soybean	mitochondrion	52.02	61.38
KRG88614	Soybean	mitochondrion	42.83	61.22
KRG88615	Soybean	mitochondrion	51.79	61.11
KRG94069	Soybean	cytosol	48.65	60.78
TraesCS5D01G437400.1	Wheat	cytosol	62.78	60.74
Bra020142.1-P	Field mustard	plastid	56.5	60.72
KRG88616	Soybean	cytosol	31.61	60.26
KRG94064	Soybean	mitochondrion	50.9	60.05
KRG94057	Soybean	mitochondrion	24.22	59.02
Bra001186.1-P	Field mustard	cytosol	51.12	56.58
Bra020764.1-P	Field mustard	cytosol	48.43	56.1
Bra040233.1-P	Field mustard	cytosol	48.65	55.78
Bra006489.1-P	Field mustard	cytosol	50.0	55.34
Bra002200.1-P	Field mustard	cytosol	49.55	55.25
KRG94058	Soybean	mitochondrion	46.41	55.05
Bra000147.1-P	Field mustard	cytosol	46.86	54.71
Bra017053.1-P	Field mustard	cytosol	47.76	53.38
KRH06646	Soybean	cytosol	35.87	52.46

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
EnsemblPlantsGene:Bra036437	EnsemblPlants:Bra036437.1	EnsemblPlants:Bra036437.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006950
GO:GO:0006970	GO:GO:0007154	GO:GO:0008150	GO:GO:0009605	GO:GO:0009628	GO:GO:0009987
GO:GO:0009991	GO:GO:0042631	GO:GO:0071472	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
UniProt:M4F5T1	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411
PANTHER:PTHR24411:SF53	InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	UniParc:UPI0002540F32	SEG:seg	:	:	:

Description

AT3G03740 (E=8e-203) ATBPM4 | ATBPM4 (BTB-POZ and MATH domain 4); protein binding

Coordinates

chrA07:-:491583..494285

Molecular Weight (calculated)

48458.4 Da

IEP (calculated)

4.657

GRAVY (calculated)

-0.338

Length

446 amino acids

Sequence
(BLAST)

001: MPSPPTTTSL SVTQTINGSH SFTIKGYSLA KGIGIGKHIA SDTFTVGGYE WAIYFYPDGK NPEDNSAYVS VFIALASDGT DVRALFELSL LDQSGKGKHK
101: VHSHFDRALE SGPYTLKYRG SMWGYKRFFR RTLLEASDYL KDDCLKINCT VGVVVSEIDC PRLHSIHVPA SDIGSHFGML LENEDGSDIT FNVSGEKFRA
201: HRLVLAARSP VFESEFLDVI GEEEGREIEV NDMEPKVFKA LLHYIYKDAL IEDAESASSS GSSVGPSASD TLAAKLLGAA DKYKLPRLSL MCESVLCKDI
301: SVDSVANILA LADRYNASAL KSVCLKFAAE NLIAVMRSDG FDYLREHCPS LQSELLKTVA GCEEELSGGG GGGGKTRSVW GQFSDGGADT NERSVRQQHA
401: WGEVNGAERS QSVWVQVVNA NASGRNNDDD NNNENGDDDD DPMAED

Best Arabidopsis Sequence Match ( AT3G03740.1 )
(BLAST)

001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED

Arabidopsis Description

BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.