Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G104190.1 | Barley | cytosol | 91.99 | 99.5 |
| TraesCS5B01G431400.2 | Wheat | cytosol | 99.31 | 99.31 |
| TraesCS5D01G437400.1 | Wheat | cytosol | 96.8 | 91.76 |
| EER90755 | Sorghum | cytosol | 83.98 | 85.55 |
| Zm00001d034400_P003 | Maize | cytosol | 83.52 | 85.28 |
| Zm00001d013094_P001 | Maize | cytosol | 82.61 | 84.35 |
| TraesCS2A01G237800.1 | Wheat | cytosol | 79.86 | 81.92 |
| GSMUA_Achr5P08970_001 | Banana | cytosol | 67.51 | 73.38 |
| GSMUA_Achr7P27230_001 | Banana | cytosol | 65.9 | 73.28 |
| GSMUA_Achr4P14800_001 | Banana | cytosol | 64.99 | 72.26 |
| VIT_06s0009g01030.t01 | Wine grape | cytosol | 68.88 | 71.16 |
| PGSC0003DMT400070468 | Potato | cytosol | 66.36 | 71.08 |
| Solyc01g009060.2.1 | Tomato | cytosol | 65.68 | 70.86 |
| PGSC0003DMT400058456 | Potato | cytosol | 65.45 | 70.62 |
| Solyc11g072070.1.1 | Tomato | cytosol | 65.9 | 70.59 |
| KRH14738 | Soybean | cytosol | 63.39 | 69.95 |
| KRH73429 | Soybean | cytosol, plastid | 63.16 | 69.7 |
| Bra006591.1-P | Field mustard | plastid | 62.93 | 67.07 |
| CDX88828 | Canola | plastid | 62.93 | 67.07 |
| CDX70957 | Canola | plastid | 62.47 | 66.59 |
| VIT_08s0056g01670.t01 | Wine grape | plastid | 65.45 | 66.36 |
| AT5G21010.1 | Thale cress | cytosol | 61.78 | 65.85 |
| KRG94896 | Soybean | mitochondrion | 64.3 | 65.05 |
| AT3G43700.1 | Thale cress | plastid | 61.33 | 64.58 |
| Bra020142.1-P | Field mustard | plastid | 61.33 | 64.58 |
| KRH06640 | Soybean | mitochondrion, plastid | 64.07 | 64.52 |
| CDY09093 | Canola | cytosol, plastid | 54.0 | 64.31 |
| KRG94056 | Soybean | cytosol | 11.44 | 63.29 |
| Bra036437.1-P | Field mustard | plastid | 63.84 | 62.56 |
| CDY29955 | Canola | plastid | 63.39 | 61.69 |
| KRG88614 | Soybean | mitochondrion | 43.94 | 61.54 |
| KRG88616 | Soybean | cytosol | 32.49 | 60.68 |
| KRG94057 | Soybean | mitochondrion | 25.4 | 60.66 |
| AT3G03740.1 | Thale cress | cytosol | 64.07 | 60.22 |
| KRG94050 | Soybean | mitochondrion | 51.03 | 58.99 |
| CDY71585 | Canola | cytosol | 27.23 | 58.91 |
| KRG94069 | Soybean | cytosol | 48.05 | 58.82 |
| KRG88615 | Soybean | mitochondrion | 50.57 | 58.47 |
| KRG94047 | Soybean | cytosol, mitochondrion, plastid | 38.9 | 58.42 |
| KRG94064 | Soybean | mitochondrion | 49.89 | 57.67 |
| CDY16586 | Canola | cytosol | 22.88 | 57.47 |
| KRH06645 | Soybean | cytosol | 51.03 | 56.31 |
| KRG94052 | Soybean | cytosol | 24.03 | 56.15 |
| KRG94053 | Soybean | cytosol | 24.03 | 56.15 |
| TraesCS2A01G255800.1 | Wheat | cytosol | 49.43 | 54.55 |
| KRG94058 | Soybean | mitochondrion | 46.45 | 53.99 |
| TraesCS2A01G135800.1 | Wheat | mitochondrion, plastid | 52.17 | 53.65 |
| CDY67137 | Canola | endoplasmic reticulum | 43.02 | 52.81 |
| KRH06646 | Soybean | cytosol | 32.95 | 47.21 |
| TraesCS5A01G452100.1 | Wheat | cytosol | 12.13 | 40.77 |
| TraesCS4A01G465200.1 | Wheat | cytosol | 30.66 | 39.76 |
| TraesCS5A01G528500.1 | Wheat | cytosol | 28.83 | 39.75 |
| TraesCS2A01G508000.1 | Wheat | cytosol | 12.59 | 39.29 |
| TraesCS5A01G041400.1 | Wheat | plastid | 31.58 | 39.2 |
| TraesCS7A01G026200.1 | Wheat | mitochondrion | 29.06 | 39.08 |
| TraesCS2A01G472700.1 | Wheat | cytosol | 32.49 | 39.01 |
| TraesCS5A01G040900.1 | Wheat | cytosol | 19.91 | 38.67 |
| TraesCS5A01G451500.1 | Wheat | cytosol | 32.04 | 38.57 |
| TraesCS4A01G465700.1 | Wheat | cytosol | 31.58 | 38.55 |
| TraesCS2A01G472600.1 | Wheat | cytosol | 29.98 | 38.53 |
| TraesCS7A01G311400.1 | Wheat | cytosol | 16.02 | 38.46 |
| TraesCS5A01G462000.1 | Wheat | cytosol | 15.33 | 38.29 |
| TraesCS1A01G101100.1 | Wheat | mitochondrion, plastid | 30.43 | 38.22 |
| TraesCS3A01G020800.1 | Wheat | cytosol | 31.12 | 38.2 |
| TraesCS3A01G019700.1 | Wheat | cytosol | 31.58 | 38.12 |
| TraesCS5A01G040800.1 | Wheat | cytosol | 30.21 | 37.82 |
| TraesCS5A01G528600.1 | Wheat | cytosol | 30.66 | 37.64 |
| TraesCS5A01G554900.1 | Wheat | cytosol | 30.66 | 37.33 |
| TraesCS3A01G020200.1 | Wheat | cytosol | 30.43 | 37.15 |
| TraesCS2A01G543300.1 | Wheat | cytosol | 28.38 | 37.01 |
| TraesCS5A01G041300.1 | Wheat | cytosol | 29.75 | 36.93 |
| TraesCS3A01G320300.1 | Wheat | cytosol | 29.98 | 36.9 |
| TraesCS4A01G462500.1 | Wheat | mitochondrion | 29.98 | 36.8 |
| TraesCS5A01G451900.1 | Wheat | cytosol | 29.98 | 36.49 |
| TraesCS2A01G470000.1 | Wheat | plastid | 29.75 | 36.41 |
| TraesCS6A01G275800.1 | Wheat | cytosol | 30.89 | 36.29 |
| TraesCS2A01G418000.1 | Wheat | cytosol | 30.43 | 36.24 |
| TraesCS5A01G361900.1 | Wheat | cytosol | 29.75 | 36.21 |
| TraesCS3A01G164400.1 | Wheat | cytosol | 20.37 | 36.03 |
| TraesCS2A01G418100.1 | Wheat | cytosol | 30.21 | 35.87 |
| TraesCS2A01G470900.1 | Wheat | cytosol | 29.52 | 35.83 |
| TraesCS5A01G451600.1 | Wheat | cytosol | 28.6 | 35.82 |
| TraesCS7A01G511400.1 | Wheat | cytosol | 29.75 | 35.81 |
| TraesCS2A01G470400.1 | Wheat | cytosol | 29.29 | 35.46 |
| TraesCS4A01G193000.1 | Wheat | cytosol | 29.29 | 35.36 |
| TraesCS2A01G458500.1 | Wheat | cytosol | 10.76 | 35.34 |
| TraesCS2A01G470700.1 | Wheat | cytosol, plastid | 29.29 | 34.5 |
| TraesCS6A01G401700.1 | Wheat | cytosol, mitochondrion, plastid | 27.69 | 34.47 |
| TraesCS7A01G511200.1 | Wheat | cytosol | 12.13 | 34.19 |
| TraesCS5A01G461800.1 | Wheat | cytosol | 26.32 | 34.02 |
| TraesCS2A01G473400.1 | Wheat | cytosol | 24.49 | 33.97 |
| TraesCS2A01G471000.1 | Wheat | cytosol | 18.31 | 33.61 |
| TraesCS2A01G366500.1 | Wheat | cytosol | 27.46 | 33.52 |
| TraesCS7A01G511500.1 | Wheat | cytosol | 28.15 | 33.42 |
| TraesCS7A01G511000.1 | Wheat | mitochondrion, plastid | 18.76 | 33.2 |
| TraesCS2A01G473300.1 | Wheat | cytosol | 22.43 | 33.11 |
| TraesCS6A01G167500.1 | Wheat | plastid | 25.17 | 32.93 |
| TraesCS2A01G458700.1 | Wheat | cytosol | 10.98 | 32.88 |
| TraesCS2A01G217100.1 | Wheat | cytosol | 27.0 | 32.78 |
| TraesCS1A01G368600.1 | Wheat | mitochondrion | 26.09 | 32.76 |
| TraesCS3A01G212400.1 | Wheat | cytosol | 25.63 | 32.56 |
| TraesCS2A01G473500.1 | Wheat | cytosol | 25.63 | 32.0 |
| TraesCS5A01G041000.1 | Wheat | cytosol, mitochondrion, plastid | 29.06 | 31.44 |
| TraesCS2A01G543600.1 | Wheat | plastid | 17.85 | 29.1 |
| TraesCS7A01G550800.1 | Wheat | cytosol | 17.39 | 27.94 |
| TraesCS2A01G471700.1 | Wheat | cytosol | 26.54 | 27.68 |
| TraesCS2A01G471800.1 | Wheat | mitochondrion | 28.38 | 27.43 |
Protein Annotations
| Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | InterPro:BPM_C | InterPro:BTB/POZ_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 |
| InterPro:MATH/TRAF_dom | PFAM:PF00651 | PFscan:PS50097 | PFscan:PS50144 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF52 |
| InterPro:SKP1/BTB/POZ_sf | SMART:SM00061 | SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like |
| EnsemblPlantsGene:TraesCS5A01G429400 | EnsemblPlants:TraesCS5A01G429400.2 | TIGR:cd00121 | TIGR:cd14736 | SEG:seg | : |
Description
No Description!
Coordinates
chr5A:+:613589064..613592270
Molecular Weight (calculated)
47438.3 Da
IEP (calculated)
4.898
GRAVY (calculated)
-0.313
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDDAGGGG DASPQHEGGG GAVVIERGAG ATAPARDAAA ASPTSSRSVT ETVNGSHRFV IQGYSLAKGM GVGKHIASET FAVGGYQWAI YFYPDGKNPE
101: DNSAYVSVFI ALASEGTDVR ALFELTLQDQ SGRGKHKVHS HFDRALDAGP YTLKYRGSMW GYKRFFRRTA LETSDFLKDD CLKINCTVGV VTSTMEYSRP
201: HSLEVPDSDI GYHFGTLLDS QEGADVIFSV AGEKFHAHKL VLAARSSFFR SEFLDPESDE ENSEVDTSNE IKEIVIDDME PKVFQAVLHF MYRDNLVGDD
301: ELSASSSDCP IFDTLAGKLL AAADKYELPR LRVLCESYLC KQISVKSVAT TLALADRHHA TELKSVCLKF AAENLSAVIR TDGFDYLKDN CPALQSEILR
401: TVAGCEEECS SGGKSQSVWG QISDGGDTSG RRVRPRV
101: DNSAYVSVFI ALASEGTDVR ALFELTLQDQ SGRGKHKVHS HFDRALDAGP YTLKYRGSMW GYKRFFRRTA LETSDFLKDD CLKINCTVGV VTSTMEYSRP
201: HSLEVPDSDI GYHFGTLLDS QEGADVIFSV AGEKFHAHKL VLAARSSFFR SEFLDPESDE ENSEVDTSNE IKEIVIDDME PKVFQAVLHF MYRDNLVGDD
301: ELSASSSDCP IFDTLAGKLL AAADKYELPR LRVLCESYLC KQISVKSVAT TLALADRHHA TELKSVCLKF AAENLSAVIR TDGFDYLKDN CPALQSEILR
401: TVAGCEEECS SGGKSQSVWG QISDGGDTSG RRVRPRV
001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED
Arabidopsis Description
BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.