Factsheet for TraesCS4A01G462500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G026200.1	Wheat	mitochondrion	78.09	85.54
TraesCS2A01G366500.1	Wheat	cytosol	73.03	72.63
TraesCS2A01G508000.1	Wheat	cytosol	24.16	61.43
TraesCS5A01G040900.1	Wheat	cytosol	37.36	59.11
TraesCS5A01G041300.1	Wheat	cytosol	57.58	58.24
TraesCS5A01G041400.1	Wheat	plastid	56.46	57.1
TraesCS5A01G452100.1	Wheat	cytosol	20.79	56.92
TraesCS7A01G511200.1	Wheat	cytosol	24.72	56.77
TraesCS5A01G040800.1	Wheat	cytosol	55.34	56.45
TraesCS3A01G019700.1	Wheat	cytosol	56.18	55.25
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	52.53	53.74
TraesCS2A01G543300.1	Wheat	cytosol	50.0	53.13
TraesCS3A01G020200.1	Wheat	cytosol	53.09	52.79
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	51.4	52.14
TraesCS3A01G320300.1	Wheat	cytosol	51.4	51.55
TraesCS5A01G462000.1	Wheat	cytosol	25.28	51.43
TraesCS3A01G020800.1	Wheat	cytosol	51.12	51.12
TraesCS7A01G511400.1	Wheat	cytosol	51.97	50.96
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	34.83	50.2
TraesCS6A01G275800.1	Wheat	cytosol	51.97	49.73
TraesCS2A01G458500.1	Wheat	cytosol	18.54	49.62
TraesCS3A01G164400.1	Wheat	cytosol	34.27	49.39
TraesCS1A01G368600.1	Wheat	mitochondrion	48.03	49.14
TraesCS4A01G193000.1	Wheat	cytosol	49.72	48.9
TraesCS5A01G451900.1	Wheat	cytosol	48.88	48.47
TraesCS2A01G458700.1	Wheat	cytosol	19.66	47.95
TraesCS5A01G451500.1	Wheat	cytosol	48.88	47.93
TraesCS7A01G311400.1	Wheat	cytosol	24.16	47.25
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	53.09	46.78
TraesCS7A01G511500.1	Wheat	cytosol	48.03	46.47
TraesCS5A01G451600.1	Wheat	cytosol	45.51	46.42
TraesCS5A01G461800.1	Wheat	cytosol	43.82	46.15
TraesCS2A01G217100.1	Wheat	cytosol	45.22	44.72
TraesCS2A01G418000.1	Wheat	cytosol	45.51	44.14
TraesCS3A01G212400.1	Wheat	cytosol	41.85	43.31
TraesCS5A01G528500.1	Wheat	cytosol	37.92	42.59
TraesCS2A01G418100.1	Wheat	cytosol	43.82	42.39
TraesCS7A01G550800.1	Wheat	cytosol	30.9	40.44
TraesCS2A01G471000.1	Wheat	cytosol	26.97	40.34
TraesCS2A01G543600.1	Wheat	plastid	30.34	40.3
TraesCS2A01G472600.1	Wheat	cytosol	38.48	40.29
TraesCS5A01G528600.1	Wheat	cytosol	40.17	40.17
TraesCS4A01G465700.1	Wheat	cytosol	40.17	39.94
TraesCS6A01G167500.1	Wheat	plastid	37.36	39.82
TraesCS2A01G470900.1	Wheat	cytosol	39.61	39.17
TraesCS4A01G465200.1	Wheat	cytosol	36.8	38.87
TraesCS2A01G470000.1	Wheat	plastid	38.76	38.66
TraesCS5A01G554900.1	Wheat	cytosol	38.76	38.44
TraesCS2A01G470400.1	Wheat	cytosol	38.76	38.23
TraesCS2A01G472700.1	Wheat	cytosol	39.04	38.19
TraesCS2A01G470700.1	Wheat	cytosol, plastid	39.61	38.01
TraesCS2A01G473400.1	Wheat	cytosol	33.43	37.78
TraesCS5A01G361900.1	Wheat	cytosol	37.64	37.33
TraesCS2A01G473500.1	Wheat	cytosol	35.96	36.57
TraesCS2A01G473300.1	Wheat	cytosol	30.06	36.15
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	40.73	34.12
TraesCS2A01G255800.1	Wheat	cytosol	36.8	33.08
TraesCS2A01G237800.1	Wheat	cytosol	36.24	30.28
TraesCS5A01G429400.2	Wheat	cytosol	36.8	29.98
TraesCS2A01G471800.1	Wheat	mitochondrion	37.64	29.65
TraesCS2A01G471700.1	Wheat	cytosol	34.83	29.59

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS4A01G462500
EnsemblPlants:TraesCS4A01G462500.1	TIGR:cd00121	TIGR:cd14736	:	:	:

Description

No Description!

Coordinates

chr4A:-:726575977..726577442

Molecular Weight (calculated)

39778.8 Da

IEP (calculated)

6.920

GRAVY (calculated)

-0.176

Length

356 amino acids

Sequence
(BLAST)

001: MASSQRPTER RASRCTPVMA RATLVFDIVG YSLHKGMGAG KFIRSPRTSV GGYEWCIRYY PDGDEGEDHV SVYLELLSKG ARARSLFDLR LLNQATGLST
101: SVTSCLKSPR VFDSVDTIKN KYAWGVHSFK KKSELENSPY LRDDHLIIEC DLSVISNVPL VVETVDIQVP PSDLADNLGT WLETGEEADV TFNVRGETFP
201: AHKILLAMRS PVFKAELYGP MGNRTARNIN VEDMQPAVFK ELLRFIYTDS LPSRDNLDDD MVKHLLVAAD RYAMERMKMI CEGILCRSLR VETVATTLAL
301: ADQHQCSRLK EACIEFIITS NRMADVVASQ GYAHLKRSCP AVLGDILESV TKSRTV

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.