Factsheet for TraesCS6A01G401700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G443900.1	Wheat	cytosol	94.87	94.87
TraesCS2A01G508000.1	Wheat	cytosol	31.05	77.86
TraesCS5A01G040900.1	Wheat	cytosol	49.0	76.44
TraesCS5A01G041400.1	Wheat	plastid	72.08	71.88
TraesCS5A01G041300.1	Wheat	cytosol	68.95	68.75
TraesCS5A01G040800.1	Wheat	cytosol	67.81	68.19
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	67.81	58.91
TraesCS7A01G511200.1	Wheat	cytosol	25.64	58.06
TraesCS5A01G452100.1	Wheat	cytosol	19.66	53.08
TraesCS3A01G019700.1	Wheat	cytosol	53.85	52.21
TraesCS4A01G462500.1	Wheat	mitochondrion	52.14	51.4
TraesCS7A01G026200.1	Wheat	mitochondrion	47.58	51.38
TraesCS5A01G462000.1	Wheat	cytosol	25.07	50.29
TraesCS2A01G458700.1	Wheat	cytosol	20.8	50.0
TraesCS3A01G020800.1	Wheat	cytosol	50.71	50.0
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	35.04	49.8
TraesCS2A01G366500.1	Wheat	cytosol	50.71	49.72
TraesCS2A01G458500.1	Wheat	cytosol	18.8	49.62
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	49.0	49.43
TraesCS3A01G020200.1	Wheat	cytosol	50.14	49.16
TraesCS3A01G320300.1	Wheat	cytosol	48.72	48.17
TraesCS7A01G511400.1	Wheat	cytosol	49.57	47.93
TraesCS7A01G311400.1	Wheat	cytosol	24.5	47.25
TraesCS2A01G543300.1	Wheat	cytosol	44.73	46.87
TraesCS7A01G511500.1	Wheat	cytosol	48.15	45.92
TraesCS6A01G275800.1	Wheat	cytosol	47.29	44.62
TraesCS3A01G164400.1	Wheat	cytosol	31.34	44.53
TraesCS1A01G368600.1	Wheat	mitochondrion	43.87	44.25
TraesCS2A01G418000.1	Wheat	cytosol	43.59	41.69
TraesCS2A01G418100.1	Wheat	cytosol	42.73	40.76
TraesCS4A01G193000.1	Wheat	cytosol	41.03	39.78
TraesCS5A01G451500.1	Wheat	cytosol	40.46	39.12
TraesCS7A01G550800.1	Wheat	cytosol	30.2	38.97
TraesCS5A01G451600.1	Wheat	cytosol	38.75	38.97
TraesCS3A01G212400.1	Wheat	cytosol	38.18	38.95
TraesCS2A01G217100.1	Wheat	cytosol	39.6	38.61
TraesCS5A01G451900.1	Wheat	cytosol	39.32	38.44
TraesCS5A01G528500.1	Wheat	cytosol	34.47	38.17
TraesCS4A01G465700.1	Wheat	cytosol	38.46	37.71
TraesCS5A01G528600.1	Wheat	cytosol	37.89	37.36
TraesCS4A01G465200.1	Wheat	cytosol	35.61	37.09
TraesCS2A01G470400.1	Wheat	cytosol	37.89	36.84
TraesCS2A01G472600.1	Wheat	cytosol	35.33	36.47
TraesCS2A01G473500.1	Wheat	cytosol	36.18	36.29
TraesCS5A01G461800.1	Wheat	cytosol	34.76	36.09
TraesCS2A01G472700.1	Wheat	cytosol	37.32	35.99
TraesCS2A01G470700.1	Wheat	cytosol, plastid	37.89	35.85
TraesCS2A01G470900.1	Wheat	cytosol	36.75	35.83
TraesCS2A01G471000.1	Wheat	cytosol	24.22	35.71
TraesCS2A01G470000.1	Wheat	plastid	36.18	35.57
TraesCS2A01G473400.1	Wheat	cytosol	31.91	35.56
TraesCS5A01G554900.1	Wheat	cytosol	36.18	35.38
TraesCS6A01G167500.1	Wheat	plastid	33.33	35.03
TraesCS2A01G473300.1	Wheat	cytosol	28.49	33.78
TraesCS5A01G361900.1	Wheat	cytosol	33.9	33.15
TraesCS2A01G543600.1	Wheat	plastid	24.79	32.46
TraesCS2A01G255800.1	Wheat	cytosol	34.19	30.3
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	35.9	29.65
TraesCS2A01G237800.1	Wheat	cytosol	34.19	28.17
TraesCS5A01G429400.2	Wheat	cytosol	34.47	27.69
TraesCS2A01G471700.1	Wheat	cytosol	31.91	26.73
TraesCS2A01G471800.1	Wheat	mitochondrion	32.76	25.44

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF211
InterPro:SKP1/BTB/POZ_sf	SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
EnsemblPlantsGene:TraesCS6A01G401700	EnsemblPlants:TraesCS6A01G401700.1	TIGR:cd00121	TIGR:cd14736	:	:

Description

No Description!

Coordinates

chr6A:+:610125024..610126346

Molecular Weight (calculated)

39778.2 Da

IEP (calculated)

6.115

GRAVY (calculated)

-0.050

Length

351 amino acids

Sequence
(BLAST)

001: MAASQGSIVR VPSRRTQETT EATVAFEIAG YSLLKSLDRG EFLSSPPFSI SGYEWCILYY PDGSGDERSQ GYASVFLKLL TKNALVRAFY RLWHLDAVRG
101: HMIKPVFSSQ VTNVFGPKSP SWGFEKFMKT TEMTYVRNDC LVMEWEVRII KETLEIQVPP SELSDNLATL LEGKKGADVT FKVQGEIFFA HKILLAMRSA
201: VFDAKFYGPM AMGEKESHDI TIDDMQPSIF KAFLHFIYTD SLPSMVDLDD NDKIEMVKHL LVAADKYAME RMKVICEGLL CKSLDVETVA TILALAEQYH
301: CSNLKDACIE FMLSSNRMND VLASQGYLHL KRSFPDIIVD LFERTVKSRK I

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.