Factsheet for TraesCS3A01G212400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G214900.1	Wheat	cytosol	58.43	80.72
TraesCS2A01G217100.1	Wheat	cytosol	73.84	70.56
TraesCS2A01G508000.1	Wheat	cytosol	20.06	49.29
TraesCS3A01G164400.1	Wheat	cytosol	35.17	48.99
TraesCS5A01G040900.1	Wheat	cytosol	31.4	48.0
TraesCS7A01G511200.1	Wheat	cytosol	21.51	47.74
TraesCS5A01G452100.1	Wheat	cytosol	18.02	47.69
TraesCS5A01G462000.1	Wheat	cytosol	24.13	47.43
TraesCS2A01G458500.1	Wheat	cytosol	18.31	47.37
TraesCS2A01G458700.1	Wheat	cytosol	19.19	45.21
OQU80115	Sorghum	cytosol	45.64	44.86
TraesCS7A01G311400.1	Wheat	cytosol	23.55	44.51
TraesCS1A01G101100.1	Wheat	mitochondrion, plastid	43.9	43.39
TraesCS2A01G543300.1	Wheat	cytosol	42.15	43.28
TraesCS6A01G275800.1	Wheat	cytosol	46.51	43.01
TraesCS2A01G418000.1	Wheat	cytosol	45.06	42.23
TraesCS4A01G462500.1	Wheat	mitochondrion	43.31	41.85
TraesCS7A01G026200.1	Wheat	mitochondrion	39.53	41.85
TraesCS2A01G418100.1	Wheat	cytosol	44.19	41.3
TraesCS3A01G020800.1	Wheat	cytosol	42.73	41.29
TraesCS5A01G451900.1	Wheat	cytosol	43.02	41.23
TraesCS3A01G019700.1	Wheat	cytosol	43.31	41.16
TraesCS5A01G041300.1	Wheat	cytosol	41.86	40.91
TraesCS3A01G320300.1	Wheat	cytosol	41.86	40.56
TraesCS5A01G461800.1	Wheat	cytosol	39.83	40.53
TraesCS5A01G040800.1	Wheat	cytosol	40.99	40.4
TraesCS7A01G511000.1	Wheat	mitochondrion, plastid	28.78	40.08
TraesCS5A01G041400.1	Wheat	plastid	40.99	40.06
TraesCS5A01G451500.1	Wheat	cytosol	41.86	39.67
TraesCS3A01G020200.1	Wheat	cytosol	41.28	39.66
TraesCS7A01G511400.1	Wheat	cytosol	41.28	39.12
TraesCS2A01G366500.1	Wheat	cytosol	40.7	39.11
TraesCS5A01G451600.1	Wheat	cytosol	39.53	38.97
TraesCS1A01G368600.1	Wheat	mitochondrion	38.95	38.51
TraesCS7A01G511500.1	Wheat	cytosol	40.99	38.32
TraesCS6A01G401700.1	Wheat	cytosol, mitochondrion, plastid	38.95	38.18
TraesCS4A01G193000.1	Wheat	cytosol	40.12	38.12
TraesCS5A01G528500.1	Wheat	cytosol	34.3	37.22
TraesCS2A01G471000.1	Wheat	cytosol	25.58	36.97
TraesCS7A01G550800.1	Wheat	cytosol	29.07	36.76
TraesCS6A01G167500.1	Wheat	plastid	34.88	35.93
TraesCS5A01G528600.1	Wheat	cytosol	36.05	34.83
TraesCS4A01G465200.1	Wheat	cytosol	34.01	34.72
TraesCS2A01G472700.1	Wheat	cytosol	36.63	34.62
TraesCS5A01G041000.1	Wheat	cytosol, mitochondrion, plastid	40.12	34.16
TraesCS4A01G465700.1	Wheat	cytosol	35.47	34.08
TraesCS2A01G472600.1	Wheat	cytosol	33.43	33.82
TraesCS2A01G470900.1	Wheat	cytosol	35.17	33.61
TraesCS2A01G470400.1	Wheat	cytosol	34.88	33.24
TraesCS2A01G473400.1	Wheat	cytosol	30.23	33.02
TraesCS2A01G473300.1	Wheat	cytosol	28.2	32.77
TraesCS5A01G361900.1	Wheat	cytosol	33.72	32.31
TraesCS5A01G554900.1	Wheat	cytosol	32.85	31.48
TraesCS2A01G470000.1	Wheat	plastid	32.56	31.37
TraesCS2A01G470700.1	Wheat	cytosol, plastid	33.72	31.27
TraesCS2A01G473500.1	Wheat	cytosol	31.1	30.57
TraesCS2A01G255800.1	Wheat	cytosol	33.14	28.79
TraesCS2A01G135800.1	Wheat	mitochondrion, plastid	34.88	28.24
TraesCS2A01G471800.1	Wheat	mitochondrion	34.88	26.55
TraesCS2A01G237800.1	Wheat	cytosol	32.56	26.29
TraesCS2A01G543600.1	Wheat	plastid	20.35	26.12
TraesCS5A01G429400.2	Wheat	cytosol	32.56	25.63
TraesCS2A01G471700.1	Wheat	cytosol	29.94	24.58

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF212
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS3A01G212400
EnsemblPlants:TraesCS3A01G212400.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr3A:+:382364662..382365696

Molecular Weight (calculated)

38740.4 Da

IEP (calculated)

5.785

GRAVY (calculated)

-0.211

Length

344 amino acids

Sequence
(BLAST)

001: MTCTAESEQG EHWFKISDYS IHRGMGVGCY IESSWFTIGG HYWRLHYYPD GYSEDGKGDM VVGLELMELC GKEFPSRVSS TISLFYWATK RFSLSSSVAM
101: SANLRDLSHF VTHNINRGKM EASEYIVDDR LTIKCIVTII KEPYVFEAEA QVPVPPSEIT DQLGKLPEAK EGADVTFEVQ GEEFPAHKLV LVVRSPVFKA
201: MLYGPMMEKD SSRIVIANMQ PVVFKFLLYF IYNDSLPDDD DDLLDGDDKK KVTRHLLVAA DRYGMERLKL MCEIILCKHL DAESVATTLA LANQHTRSGL
301: QDACIRFIAS SSTKMLDDVV ASGGYKSSQK NLFRYHNGDV GKSK

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.