CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 4
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94057	Soybean	mitochondrion	55.77	95.08
KRG88616	Soybean	cytosol	69.55	92.73
KRG94050	Soybean	mitochondrion	99.04	81.75
KRG88615	Soybean	mitochondrion	98.4	81.22
KRG94064	Soybean	mitochondrion	96.79	79.89
KRG94069	Soybean	cytosol	88.78	77.59
KRG94047	Soybean	cytosol, mitochondrion, plastid	70.51	75.6
KRG94058	Soybean	mitochondrion	88.78	73.67
KRG94056	Soybean	cytosol	17.63	69.62
KXG25976	Sorghum	cytosol	25.32	65.29
KRG94052	Soybean	cytosol	37.82	63.1
KRG94053	Soybean	cytosol	37.82	63.1
KRG94896	Soybean	mitochondrion	72.76	52.55
KRH06640	Soybean	mitochondrion, plastid	72.44	52.07
KRH06645	Soybean	cytosol	63.78	50.25
GSMUA_Achr7P27230_001	Banana	cytosol	62.82	49.87
GSMUA_Achr5P08970_001	Banana	cytosol	62.5	48.51
KRH73429	Soybean	cytosol, plastid	61.54	48.48
VIT_08s0056g01670.t01	Wine grape	plastid	66.67	48.26
KRH06646	Soybean	cytosol	46.79	47.87
HORVU5Hr1G104190.1	Barley	cytosol	61.54	47.52
GSMUA_Achr4P14800_001	Banana	cytosol	59.62	47.33
KRH14738	Soybean	cytosol	59.62	46.97
Os07t0167200-01	Rice	cytosol	63.46	46.7
TraesCS2B01G262200.1	Wheat	cytosol	62.82	46.01
TraesCS2A01G237800.1	Wheat	cytosol	62.5	45.77
TraesCS2D01G246900.1	Wheat	cytosol, plastid	62.5	45.77
Zm00001d013094_P001	Maize	cytosol	61.86	45.09
Zm00001d034400_P003	Maize	cytosol	61.54	44.86
EER90755	Sorghum	cytosol	61.22	44.52
TraesCS5B01G431400.2	Wheat	cytosol	62.18	44.39
Zm00001d018887_P002	Maize	cytosol	61.22	44.21
TraesCS5A01G429400.2	Wheat	cytosol	61.54	43.94
KXG34465	Sorghum	cytosol	61.86	43.76
Bra036437.1-P	Field mustard	plastid	61.22	42.83
HORVU2Hr1G055140.1	Barley	cytosol	62.5	42.48
CDY29955	Canola	plastid	60.9	42.32
AT3G03740.1	Thale cress	cytosol	62.82	42.15
TraesCS5D01G437400.1	Wheat	cytosol	61.54	41.65
KRG95474	Soybean	plastid	54.49	41.46
KRH67156	Soybean	plastid	53.85	40.98
KRH71465	Soybean	plastid	53.21	40.29
KRH31976	Soybean	plastid	53.21	40.19
KRG97837	Soybean	cytosol	51.28	38.65
KRH31032	Soybean	nucleus	50.96	38.31
CDY67137	Canola	endoplasmic reticulum	38.46	33.71

Protein Annotations

EntrezGene:100794274	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
EnsemblPlantsGene:GLYMA_U043900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1N710	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	EnsemblPlants:KRG88614	ProteinID:KRG88614	ProteinID:KRG88614.1	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411	PANTHER:PTHR24411:SF53	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000233E61D	:

Description

hypothetical protein

Coordinates

chrscaffold_91:+:7408..9166

Molecular Weight (calculated)

34990.0 Da

IEP (calculated)

6.877

GRAVY (calculated)

-0.061

Length

312 amino acids

Sequence
(BLAST)

001: MSRAMCNPTM VSRSVLGSQT SSKSVIETMS GSHEFVIKGY SLTKGMGIGK YIVSETFIVG GFQWAIYFFP DGRDPKDNAA YVSVFVALHS KSTNVRALFD
101: LTLLDLCKKG EHKVHSHFSH SLTIGPYTLI NHGSMWGYTR FFKRRHLETS NFLKDDCLKI NCTIAVLVSS IDSSQLNTIQ VPESDIGEHF GMLLEDEESF
201: DVTFSVAGER FHAHKLVLAA RSTMFETQFF NAMKKDDQEI VVIDMEPKVF KALLHFVALA DATHLKSICQ KFSAENFDAV MHSDGFEYLK KNCPLLQSEL
301: LKTGVGCEKE FS

Best Arabidopsis Sequence Match ( AT3G03740.1 )
(BLAST)

001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED

Arabidopsis Description

BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.