CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94056	Soybean	cytosol	27.15	100.0
KRG94053	Soybean	cytosol	53.61	83.42
KRG94052	Soybean	cytosol	53.61	83.42
KRG94050	Soybean	mitochondrion	98.63	75.93
KRG88615	Soybean	mitochondrion	97.94	75.4
KRG94064	Soybean	mitochondrion	96.22	74.07
KRG94069	Soybean	cytosol	88.66	72.27
KRG94057	Soybean	mitochondrion	44.67	71.04
KRG88614	Soybean	mitochondrion	75.6	70.51
KRG94058	Soybean	mitochondrion	87.29	67.55
KXG25976	Sorghum	cytosol	27.49	66.12
KRG88616	Soybean	cytosol	49.48	61.54
KRG94896	Soybean	mitochondrion	73.2	49.31
KRH06645	Soybean	cytosol	66.67	48.99
KRH06640	Soybean	mitochondrion, plastid	72.85	48.85
GSMUA_Achr5P08970_001	Banana	cytosol	61.51	44.53
GSMUA_Achr7P27230_001	Banana	cytosol	59.79	44.27
VIT_08s0056g01670.t01	Wine grape	plastid	65.29	44.08
GSMUA_Achr4P14800_001	Banana	cytosol	57.73	42.75
KRH73429	Soybean	cytosol, plastid	58.08	42.68
HORVU5Hr1G104190.1	Barley	cytosol	58.42	42.08
KRH14738	Soybean	cytosol	56.01	41.16
Os07t0167200-01	Rice	cytosol	59.79	41.04
TraesCS2D01G246900.1	Wheat	cytosol, plastid	59.79	40.85
TraesCS2B01G262200.1	Wheat	cytosol	59.11	40.38
TraesCS2A01G237800.1	Wheat	cytosol	59.11	40.38
Bra036437.1-P	Field mustard	plastid	61.51	40.13
Zm00001d018887_P002	Maize	cytosol	59.11	39.81
Zm00001d013094_P001	Maize	cytosol	58.42	39.72
Zm00001d034400_P003	Maize	cytosol	58.42	39.72
KXG34465	Sorghum	cytosol	60.14	39.68
CDY29955	Canola	plastid	61.17	39.64
EER90755	Sorghum	cytosol	58.08	39.39
TraesCS5A01G429400.2	Wheat	cytosol	58.42	38.9
AT3G03740.1	Thale cress	cytosol	61.86	38.71
TraesCS5B01G431400.2	Wheat	cytosol	58.08	38.67
HORVU2Hr1G055140.1	Barley	cytosol	59.11	37.47
TraesCS5D01G437400.1	Wheat	cytosol	58.42	36.88
KRG95474	Soybean	plastid	51.89	36.83
KRH67156	Soybean	plastid	51.55	36.59
KRH71465	Soybean	plastid	50.52	35.68
KRH31976	Soybean	plastid	50.52	35.59
KRG97837	Soybean	cytosol	49.14	34.54
KRH31032	Soybean	nucleus	49.14	34.46
KRH06646	Soybean	cytosol	32.65	31.15
CDY67137	Canola	endoplasmic reticulum	36.77	30.06

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A0R0EIF6	EMBL:ACUP02011699
EMBL:ACUP02011700	InterPro:BACK	InterPro:BPM_C	InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_19G057800	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	EnsemblPlants:KRG94047
ProteinID:KRG94047	ProteinID:KRG94047.1	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF07707	PFscan:PS50144
PANTHER:PTHR24411	PANTHER:PTHR24411:SF53	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
UniParc:UPI0006ED7435	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:11151585..11153384

Molecular Weight (calculated)

32718.4 Da

IEP (calculated)

6.174

GRAVY (calculated)

0.022

Length

291 amino acids

Sequence
(BLAST)

001: MVSRSVLGSQ TSSKSVTETM SGSHEFVIKG YSLTKGMGIG KYIVSETFIV GGFQWAIYFF PDGRDPKDNA AYVSVFVALH SKSTNVRALF DLTLLDLCKK
101: GEHKVHSHFS HSLTIGPYTL INHGSMWTRD LLVLANRSTM YETQFFNAMK NDDQEIVVID MEPKALLHFV YRDTLLEDEE LFMLDSSFFP SLSESFIAKL
201: LAAGEKYGLP RLMLMCESIL CKDISVDSVA YIFALADRYC ATHLKSICQK FSAENFDAVM HSDGFEYLKK NCPLLQSELL KTGVGCEKEF S

Best Arabidopsis Sequence Match ( AT3G03740.1 )
(BLAST)

001: MKSVIFTEEK NLQRQNPLQK SEQQRRNFEM PSPPTTTSLS VTQTINGSHS FTIKGYSLAK GIGIGKHIAS DTFTVGGYQW AIYFYPDGKN PEDNSAYVSV
101: FIALASDGTD VRALFELSLL DQSGKGKHKV HSHFDRALES GPYTLKYRGS MWGYKRFFRR LMLETSDFLK DDCLKINCTV GVVVSEIDCP RLHSIHVPAS
201: DIGSHFGMLL ENEDGSDITF NVSGEKFRAH RLVLAARSPV FESEFLDVTG EEDRDIEVTD MEPKVFKALL HYIYKDALIE DAESSSSSGS SVGPSASDTL
301: AAKLLGAADK YKLPRLSLMC ESVLCKDISV DSVANILALA DRYNASALKS VCLKFAAENL IAVMRSDGFD YLREHCPSLQ SELLKTVAGC EEELSGGGGK
401: TRSVWGQFSD GGAETNGRQA QTWGDINGGA ERSQSVWVEV VNANGSGRNN NDNNNSDDPM AELED

Arabidopsis Description

BPM4BTB/POZ and MATH domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.