Factsheet for Bra006591.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000147.1-P
Bra017053.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G21010.1	Bra000147.1-P	AT2G39760.1	15618422
AT5G21010.1	Bra017053.1-P	AT2G39760.1	15618422

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88828	Canola	plastid	99.27	99.27
AT5G21010.1	Thale cress	cytosol	88.05	88.05
Bra020142.1-P	Field mustard	plastid	85.12	84.1
KXG25976	Sorghum	cytosol	23.41	79.34
KRH73429	Soybean	cytosol, plastid	65.85	68.18
KRH14738	Soybean	cytosol	65.61	67.93
HORVU5Hr1G104190.1	Barley	cytosol	66.34	67.33
VIT_06s0009g01030.t01	Wine grape	cytosol	69.27	67.14
GSMUA_Achr7P27230_001	Banana	cytosol	63.41	66.16
PGSC0003DMT400070468	Potato	cytosol	65.12	65.44
PGSC0003DMT400058456	Potato	cytosol	64.63	65.43
GSMUA_Achr5P08970_001	Banana	cytosol	63.9	65.17
GSMUA_Achr4P14800_001	Banana	cytosol	62.44	65.14
TraesCS2D01G246900.1	Wheat	cytosol, plastid	67.56	65.02
Solyc11g072070.1.1	Tomato	cytosol	64.63	64.95
TraesCS2B01G262200.1	Wheat	cytosol	67.32	64.79
TraesCS2A01G237800.1	Wheat	cytosol	67.07	64.55
Solyc01g009060.2.1	Tomato	cytosol	63.66	64.44
Os07t0167200-01	Rice	cytosol	66.34	64.15
Zm00001d034400_P003	Maize	cytosol	66.83	64.02
Zm00001d013094_P001	Maize	cytosol	66.59	63.78
EER90755	Sorghum	cytosol	65.85	62.94
TraesCS5A01G429400.2	Wheat	cytosol	67.07	62.93
TraesCS5B01G431400.2	Wheat	cytosol	66.34	62.24
KXG34465	Sorghum	cytosol	65.37	60.77
Zm00001d018887_P002	Maize	cytosol	63.9	60.65
HORVU2Hr1G055140.1	Barley	cytosol	66.83	59.7
Bra036437.1-P	Field mustard	plastid	64.63	59.42
TraesCS5D01G437400.1	Wheat	cytosol	66.34	59.0
Bra040233.1-P	Field mustard	cytosol	50.24	52.96
Bra001186.1-P	Field mustard	cytosol	51.71	52.61
Bra020764.1-P	Field mustard	cytosol	48.29	51.43
Bra006489.1-P	Field mustard	cytosol	50.49	51.36
Bra002200.1-P	Field mustard	cytosol	49.76	51.0
Bra000147.1-P	Field mustard	cytosol	47.07	50.52
Bra017053.1-P	Field mustard	cytosol	48.54	49.87

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
EnsemblPlantsGene:Bra006591	EnsemblPlants:Bra006591.1	EnsemblPlants:Bra006591.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	UniProt:M4CQV0	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFAM:PF00917	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR24411	PANTHER:PTHR24411:SF52	InterPro:SKP1/BTB/POZ_sf
SMART:SM00061	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI00025400BD

Description

AT5G21010 (E=3e-210) ATBPM5 | ATBPM5 (BTB-POZ and MATH domain 5); protein binding

Coordinates

chrA03:+:4185079..4187222

Molecular Weight (calculated)

45474.9 Da

IEP (calculated)

6.899

GRAVY (calculated)

-0.303

Length

410 amino acids

Sequence
(BLAST)

001: MSGSQIPRSN PDRVSSPTSS KSVTQTVNGS HQFVIQGYRL AKGMGVGKHI ASDNFSVGGY QWGIFFYPDG KNPEDNSAYV SVFVALASEG TEVRALFELA
101: LVDQSGKGNH KVHSHFERSL DSGPYTLKYK GSMWGYKRFY RRTQLETSDF LKDDCLIINC TVGVVVSEVQ CPRLHSIRVP DSELGSHFGF LLDSMEGSDV
201: TFDIAGEKFQ AHKLVLAARS PFFKSKFFTE PEENNREVTI NNLEPKVFKA LLQFMYKDSL PEDVEPVAAH TYDLLKLPEM YETLIVKLLA AADKYNLNRL
301: RLLCESHICK GVSVKSVAKI LALADRYKAT ELKDVCLKFT AENLAAVLET DAYQQLKDEC LSLQSELLKA VAGYEEASNS TGGAKSQSVW AQLSDGGGDT
401: SSRHVRQRTT

Best Arabidopsis Sequence Match ( AT5G21010.1 )
(BLAST)

001: MSESVIQGSN PDRVLSPTSS KSVTQTVNGS HQFVIQGYSL AKGMGIGKHI ASDNFSVGGY QWGIFFYPDG KNPEDNSSYV SVFIALASEG TEVRALFELA
101: LVDQSGKGKH KVHSHFERSL DGGPYTLKYR GSMWGYKRFF RRSILETSDY LKDDCLIINC TVGVVVSEIL CPQLHSVHVP DSELGSHFGV LLDSMEGSDI
201: TFNIAGEKFL AHKLVLAARS PFFKSKFFSE FEANNTEVTI NDLEPKVFKA LLQFMYKDSL PEDVEPATAH TFERLKLSEI YETLIVKVLA AADKYDLIRL
301: RLLCESHICK GVSVKSVAKI LALADRYNAK ELKGVCLKFT AENLAAVLET DAYQQMKDEC VTLQSELLKA VAGHEEGSNS TGGAKSQSVW AQLSDGGGDT
401: TSRHVRQRTT

Arabidopsis Description

BPM5BTB/POZ and MATH domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q1EBV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.